View source for Links to Additional Echinoderm Datasets

This page will provide links to additional datasets for various echinoderms organized by class.


<p>'''Subphylum Echinozoa'''</p>
:Class '''Echinoidea''' (sea urchins)

::''Eucidaris tribuloides'' (slate pencil urchin)
:::Accession: [https://www.ncbi.nlm.nih.gov/assembly/GCA_001188425.1 GCA_001188425.1]

::''Heliocidaris erythrogramma'' (short spined sea urchin)
:::Accession: [https://www.ncbi.nlm.nih.gov/datasets/genome/GCA_025617745.1 GCA_025617745.1]

::''Heliocidaris tuberculata'' (red sea urchin)
:::Accession: [https://www.ncbi.nlm.nih.gov/datasets/genome/GCA_025618425.1 GCA_025618425.1]

::''Paracentrotus lividus'' (common urchin)
:::Accession: [https://www.ncbi.nlm.nih.gov/datasets/genome/GCA_940671915.1 GCA_940671915.1]


:Class '''Holothuroidea''' (sea cucumbers)

::''Apostichopus japonicus'' (Japanese sea cucumber)
:::Accession: [https://www.ncbi.nlm.nih.gov/datasets/genome/GCA_002754855.1 GCA_002754855.1]

::''Apostichopus parvimensis'' (warty sea cucumber)
:::Accession: [https://www.ncbi.nlm.nih.gov/assembly/GCA_000934455.1 GCA_000934455.1]

::''Holothuria leucospilota'' (black sea cucumber)
:::Accession: [https://www.ncbi.nlm.nih.gov/datasets/genome/GCA_029531755.1 GCA_029531755.1]

::''Holothuria scabra'' (sandfish)
:::Accession: [https://www.ncbi.nlm.nih.gov/datasets/genome/GCA_026123075.1 GCA_026123075.1]

::''Stichopus chloronotus'' (greenfish sea cucumber/spiky sea cucumber/black knobby sea cucumber)
:::Accession: [https://www.ncbi.nlm.nih.gov/datasets/genome/GCA_021234535.1 GCA_021234535.1]


<p>'''Subphylum Asterozoa'''</p>
:Class '''Asteroidea''' (sea stars)

::''Acanthaster planci'' (crown-of-thorns sea star)
:::Accession: [https://www.ncbi.nlm.nih.gov/genome/?term=GCA_001949145.1 GCA_001949145.1]
:::Publication: [http://doi.org/10.1038/nature22033 2017]
:::[https://www.ncbi.nlm.nih.gov/sra/?term=Acanthaster+planci SRA]
:::[https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GPL23315 GEO]

::''Asterias rubens'' (European sea star)
:::Accession: [https://www.ncbi.nlm.nih.gov/genome/?term=GCA_902459465.3 GCA_902459465.3]
:::[https://www.ncbi.nlm.nih.gov/sra/?term=Asterias+rubens SRA]

::''Luidia sarsii'' (starfish)
:::Accession: [https://www.ncbi.nlm.nih.gov/datasets/genome/GCA_949987565.1 GCA_949987565.1]

::''Marthasterias glacialis'' (spiny starfish)
:::Accession: [https://www.ncbi.nlm.nih.gov/datasets/genome/GCA_911728455.2 GCA_911728455.2]

::''Patiriella regularis'' (New Zealand sea star)
:::Accession: [https://www.ncbi.nlm.nih.gov/datasets/genome/GCA_900067625.1 GCA_900067625.1]
:::Publication: [http://doi.org/10.1186/s13742-016-0125-6 2016]
:::[https://www.ncbi.nlm.nih.gov/sra/?term=Patiriella+regularis SRA]

::''Pisaster brevispinus'' (pink sea star)
:::Accession: [https://www.ncbi.nlm.nih.gov/datasets/genome/GCA_023634235.1 GCA_023634235.1]

::''Plazaster borealis'' (octopus starfish)
:::Accession: [https://www.ncbi.nlm.nih.gov/datasets/genome/GCA_021014325.1 GCA_021014325.1]

::''Pisaster ochraceus'' (purple sea star)
:::Accession: [https://www.ncbi.nlm.nih.gov/datasets/genome/GCA_010994315.2 GCA_010994315.2]
:::Publication: [http://doi.org/10.1111/mec.15386 2020]
:::[http://genome.ucsc.edu/cgi-bin/hgGateway?hgsid=848819311_uTfQQofCxtzMRnKAidqhoYa6eexL UCSC genome browser]
:::[https://www.ncbi.nlm.nih.gov/sra/?term=Pisaster+ochraceus SRA]
:::[https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE144422 GEO]


:Class '''Ophiuroidea''' (brittle stars)

::''Ophiothrix spiculata'' (spiny brittle star)
:::Accession: [https://www.ncbi.nlm.nih.gov/assembly/GCA_000969725.1 GCA_000969725.1]


<p>'''Subphylum Crinozoa'''</p>
:Class '''Crinoidea'''

::''Antedon bifida'' (rosy feather star)
:::Accession: [https://www.ncbi.nlm.nih.gov/datasets/genome/GCA_963402885.1 GCA_963402885.1]