QPCR and Nanostring Data Relevant to Ectoderm Network

Note that the gene names listed in the table have been updated according to nomenclature guidelines and may have changed on the gene pages in Echinobase, however, they are listed as synonyms and the gene pages can be found by searching for the name listed in the table.

Perturbation Ct:[Ub-C]-[Ub-Exp]

March 01, 2010

Ub, ubiquitin mRNA control used for internal standardization; C_T, cycle no. at threshold; C, control embryo sample; Exp, sample from perturbed embryos. The quantity of transcript at any point in the reaction is I(1.94^C_T), where I is the initial amount in the reaction mixture. A positive number means the number of transcripts is increased by the perturbation; a negative number means the number of transcripts is decreased. Data are listed that are considered significant where significant means more than three-fold increase or decrease from control transcript levels (normalized C_T difference from control is <-1.6 or >+1.6). Smaller effects are shown as "NS", except where individual NS data are included together with other significant measurements to display scatter or inconsistencies amongst different batches of cDNA. Commas separate replicate measurements in the same cDNA batch; slashes indicate different batches of cDNA from independent experiments.

NOTE: Nanostring results are mixed with QPCR results in the table. Nanostring values, noted in the table with (*), were converted from fold change to DeltaCt for direct comparison with QPCR results.

Gene	Perturbation	12-16 h	17-21 h	23-28 h	30-36 h	41-48 h	60-72 h	Data of:
alx1²⁴	Pmar1 MOE	+4.4/+4.7		+3.2/+5.8				K. Young, L. Vega & P. Oliveri
	Cad MOE	-5.3/-4.8		-5.2/-3.2				K. Young, L. Vega & P. Oliveri
	Pmar1 MOE + Cad MOE	+3.1/+3.9		+4.3/+7.5				K. Young, L. Vega & P. Oliveri
	Pmar1-En	+2.4/+2.3		+2.0/+2.9				K. Young, L. Vega & P. Oliveri
	Pmar1-En + Cad MOE	+2.5		+2.6/+4.3				K. Young, L. Vega & P. Oliveri
	Alx1 MASO		+1.9,+1.7/+1.6/NS/+2.2/NS/NS/NS	NS,NS/+1.9/NS/NS/NS/NS/NS				P. Oliveri, L. Vega, Q. Tu & J. Yun
	Soxb1 MOE²⁶	-3.1,-3.1	NS,NS	NS,NS				L. Chen
	Ets1 MASO	NS/NS	NS,NS/NS/NS/NS/NS	-3.6/-1.8/-2.0,NS/-1.7/-1.95/-2.58/NS				P. Oliveri, L. Vega, Q. Tu & J. Yun
	Snail MASO⁴⁸			NS/NS/NS				S. Wu & D. McClay
	Tgif MASO		NS/NS/NS/NS/NS/NS/NS/NS	(-2.41/NS/-2.49/NS/NS/NS/-2.05/NS[24 h])(NS/NS/NS/NS[27 h])				Q. Tu, P. Oliveri, J. Yun & I. Peter
	Tel MASO		+1.63/NS/NS	NS/NS/NS				Q. Tu, P. Oliveri & J. Yun
	FoxN2/3 MASO		NS/+2.0/NS	NS/NS/NS				Q. Tu, P. Oliveri & J. Yun
	Hex MASO		+2.02/+2.27/NS	NS/NS/NS				Q. Tu, P. Oliveri & J. Yun
	Erg MASO		+3.11/NS/+3.34/NS/NS	NS/NS/NS/NS/NS				Q. Tu, P. Oliveri & J. Yun
	Blimp1b MASO		NS/NS/+1.67/+1.94/NS	(NS/NS/NS/NS/NS[24 h])(NS/NS/NS/NS/NS[27 h])				I. Peter & J. Yun
	Bra MASO		NS/NS/NS/+1.83	(NS/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h])				I. Peter & J. Yun
	N MASO		NS/NS/NS	(NS/NS/NS/+1.65[24 h])(NS/NS/NS/NS[27 h])				I. Peter & J. Yun
	Myc MASO		NS/NS/NS/NS	(NS/-1.91/NS/NS[24 h])(NS/NS/NS/NS[27 h])				I. Peter & J. Yun
	Dac MASO		NS/NS/NS/NS	(NS/-1.62/NS/NS[24 h])(NS/NS/NS/NS[27 h])				I. Peter & J. Yun
blimp1a	Brn1/2/4 MASO					-4.4		C. Yuh
blimp1b	Blimp1b MASO	+2.1,+1.8	NS/NS/NS/NS/NS/NS/NS/+1.57/+1.77/NS	(NS/+1.86/NS/+1.86/+1.58[24 h])(NS/+1.83/NS/NS[27 h])NS/NS		+2.3		C. Livi, I. Peter & J. Yun
	Blimp1b-En	-4.0,-4.8	-7.8,-8.0	-7.4,-5.0/-5.3/-2.1,-2.2				C. Livi
	Cad MOE	-5.9/-4.8/-4.2	-4.6/-7.8	-5.1/-14.3/-4.6				A. Ransick, T. Minokawa, P. Oliveri & L. Vega
	Otx-En	-2.3/-1.6	NS/NS/NS	-2.5/-3.3/NS				A. Ransick & T. Minokawa
	Eve MASO	NS/NS/NS	NS/-2.44/NS	(-2.12/NS/-3.34[24 h])(-3.13/-3.69/-1.74[27 h])-1.9,-2.2				A. Ransick, C. Livi & I. Peter
	Pmar1 MOE			-2.6				P. Oliveri & L. Vega
	Wnt8 MASO	(NS,-2.6,-2.1 (12 h)[12 h])(-2.8,NS,-3.1 (16 h)[16 h])						J. Smith
	Tgif MASO		NS/NS/NS/NS	(-1.72/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h])				I. Peter & J. Yun
	N MASO		+2.35/+1.94/NS	(+2.0/NS/NS/NS[24 h])(+1.85/NS/NS/NS[27 h])				I. Peter & J. Yun
	Krl MASO		NS/NS/NS/-1.94	(NS/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h])				I. Peter & J. Yun
	GataE MASO		NS/NS/NS/NS	(NS/NS/NS/-2.22[24 h])(NS/NS/NS/NS[27 h])				I. Peter & J. Yun
	Hox11/13b MASO		NS/-1.93/-1.47	(-2.05/-2.0/-1.86[24 h])(-1.77/-1.6/-2.23[27 h])				I. Peter
bra	GataE MASO		-2.8,-2.4/-2.8,-3.2/-1.6	-1.6,NS/-3.3,-3.2/-2.1,-2.2	-2.8			P. Y. Lee & C. Yuh
	Blimp1b-En	-2.0,-3.3	-9.0,-9.0	-5.2,-5.5/-5.0/-2.3				C. Livi
	FoxA MASO		NS/NS	(NS[24 h])(NS[27 h])NS/NS/NS	+1.6/+1.6/+2.1	NS/NS		P. Oliveri, I. Peter & J. Yun
	Cad MOE	NS/NS	-4.7/-2.1	-4.4/-3.0/-2.4				A. Ransick, T. Minokawa & C. Livi
	Elk-En			-3.2,-2.2,-4.1				M. Arnone
	Otx-En		-2.5/-3.4/-4.3/-8.2	-2.4/-2.0/-5.2/-4.6				A. Ransick & T. Minokawa
	Hox11/13b MASO		-3.0/-2.18/-2.52	(-2.21/-2.11/NS[24 h])(-1.9/-3.34/-2.19[27 h])+1.9/NS		NS		C. Arenas-Mena & I. Peter
	Soxb1 MOE²⁶		NS,NS	-2.9,-3.4				L. Chen
	Tgif MASO		NS/NS/NS/NS	(NS/-1.74/NS/NS[24 h])(NS/NS/NS/NS[27 h])				I. Peter & J. Yun
	Bra MASO		-1.66/NS/NS/NS	(NS/NS/-2.87/NS[24 h])(NS/NS/NS/NS[27 h])				I. Peter & J. Yun
	Eve MASO	NS/NS	NS/NS	(NS/-1.75/NS[24 h])(NS/NS/NS[27 h])				I. Peter
Brn1/2/4	Otxb1/2 MASO				NS	-1.7/NS/-2.5/-1.7/NS		C. Yuh
	Dac MASO		NS/NS	(NS/NS[24 h])(-3.06/NS[27 h])				I. Peter & J. Yun
	Tgif MASO		NS/NS	(NS/NS[24 h])(-2.48/-2.83[27 h])				I. Peter & J. Yun
	Krl MASO		NS/NS/NS	(NS/NS/NS[24 h])(NS/-2.47/-2.38[27 h])				I. Peter & J. Yun
	Blimp1b MASO		NS/NS/NS	(NS/NS/NS[24 h])(-1.73/-3.24/-2.19[27 h])				I. Peter & J. Yun
	Myc MASO		NS/NS	(NS/NS[24 h])(-2.14/-3.77[27 h])				I. Peter & J. Yun
	GataE MASO		NS/NS/NS	(NS/NS/NS[24 h])(-2.86/-1.74/-2.47[27 h])				I. Peter & J. Yun
	Bra MASO		NS/NS	(NS/NS[24 h])(-2.63/-2.6[27 h])				I. Peter & J. Yun
	Eve MASO	NS/NS	NS/NS/NS	(NS/NS/NS[24 h])(-1.88/-2.72/-2.01[27 h])				I. Peter
	Otxa MASO		NS/NS/NS	(NS/NS/NS[24 h])(-1.66/-2.78/-2.82[27 h])				I. Peter
	SoxC MASO		NS/NS/NS	(NS/NS/NS[24 h])(NS/NS/-2.05[27 h])				I. Peter
	OtxHD MASO		NS/NS/NS	(NS/NS/NS[24 h])(NS/-1.36/-2.03[27 h])				I. Peter
capk	Bra MASO¹			-1.7				J. Rast
cyclophillin	Pmar1 MOE	+3.3		+5.5				P. Oliveri
	Pmar1-En	NS		+3.4				P. Oliveri
	Dri MASO	-2.6/-2.7	-3.6/NS/-1.8/NS/NS/NS	NS/NS/NS				G. Amore, Q. Tu, P. Oliveri & J. Yun
	Dri-En		-1.8/-2.4					G. Amore
	Gsc MASO³⁸		-2.4,NS	NS/-1.9				G. Amore
	Soxb1 MOE²⁶			-3.6,-7.3/-2.2,-1.7				L. Chen
	Soxb1-En			-3.9,-2.6				L. Vega & W. Chiu
	Ets1 MASO		-3.12,-3.03/NS/-1.84/NS/-2.17/-4.04	-3.02,-3.6/-3.25/NS/-2.39/-2.34/-2.56/-2.07				P. Oliveri, Q. Tu & J. Yun
	Alx1 MOE		-2.56,-2.46/NS	-2.81,-3.4/NS/NS				P. Oliveri
	Ets1 MASO + Alx1 MOE		-5.31,-5.22/-3.7	-5.47,-6.05/-3.69/-3.57				P. Oliveri
	Hex MASO		NS/NS/NS	NS/-1.91/NS				Q. Tu, P. Oliveri & J. Yun
	Erg MASO		NS/NS/NS/NS/-1.68	NS/NS/NS/NS/NS				Q. Tu, P. Oliveri & J. Yun
dac	Dac MASO		NS/NS/NS/NS	(NS/NS/NS/NS[24 h])(+1.61/+1.64/NS/+1.67[27 h])				I. Peter & J. Yun
	Otxa MASO		NS/+1.97/NS	(NS/NS/NS[24 h])(NS/NS/NS[27 h])				I. Peter
	Eve MASO	NS/NS	NS/NS/NS	(NS/NS/NS[24 h])(NS/-1.64/NS[27 h])				I. Peter
delta	Cad MOE	-3.3/-3.9	-1.6/NS	NS/-1.9				A. Ransick & T. Minokawa
	Pmar1 MOE	+1.8/+3.2		+2.6/+2.6				P. Oliveri
	Pmar1-En	+1.8/+2.0		+3.1/+2.0				P. Oliveri
	Soxb1 MOE²⁶	-3.7,-3.3	-1.8,-2.4	-2.3,-2.2/NS				L. Chen
	Tel MASO		+1.81/NS/NS	NS/NS/NS				Q. Tu, P. Oliveri & J. Yun
	FoxN2/3 MASO		NS/NS/NS	+1.63/NS/NS				Q. Tu, P. Oliveri & J. Yun
	Hex MASO		NS/NS/NS	NS/+1.78/NS				Q. Tu, P. Oliveri & J. Yun
	N MASO		NS/-1.74/NS	(NS/NS/NS/-1.92[24 h])(NS/NS/NS/NS[27 h])				I. Peter & J. Yun
	Eve MASO	NS/NS	NS/NS/NS	(-1.62/NS/NS[24 h])(NS/NS/NS[27 h])				I. Peter
	Otxa MASO		NS/+1.82/NS	(NS/NS/NS[24 h])(NS/NS/NS[27 h])				I. Peter
dpt	Bra MASO¹			-6.8				J. Rast
	DnN MOE⁸		-1.7					C. Calestani
	Elk-En⁵			-2.1,-2.2,-4.6				M. Arnone
	Krl MASO^{18, 26}	-3.8/-3.8	NS/NS	-3.1/-2.8/-2.0,-1.6				C. Livi
	Gcm MASO		-2.6	-5.7/-3.6				A. Ransick
dri	Pmar1 MOE	+3.6		+6.7				P. Oliveri
	Pmar1-En	+2.4		+7.2				P. Oliveri
	Dri MASO²⁰		NS/NS/NS/NS/NS	NS/NS/NS/NS/NS	-1.8/-4.5			G. Amore, Q. Tu, P. Oliveri & J. Yun
	Alx1 MASO		-4.8,-3.6/-4.1/-3.1/-1.8/-3.88/-3.16/-4.26	-1.9/-2.9/NS/-2.94/-3.4/-2.91				P. Oliveri, Q. Tu & J. Yun
	Ets1 MASO⁴²		-2.8/-3.6/-5.17,-5.83/-2.76/-3.4,-2.58/-4.86/-4.58/-2.58/-4.25	-1.7/-2.3/-3.57,-2.12/-2.32/-2.17,-2.97/-3.55/-4.46/-3.12/-2.51				P. Oliveri, Q. Tu & J. Yun
	Soxb1 MOE²⁶		-3.0,-3.4	-2.9,-5.1				L. Chen
	Tbr MASO⁴²		NS/NS/+1.6/+2.8/+2.0/NS/NS/NS	+2.1/NS/+2.0/+1.6/NS/NS				P. Oliveri, L. Vega, Q. Tu & J. Yun
	Alx1 MOE		NS,NS/NS/-2.44,-1.62	NS,NS/+2.26/NS,NS				P. Oliveri
	Ets1 MASO + Alx1 MOE⁴⁷		-1.85,-2.51/NS/-5.53,-4.7	-3.39,-1.93/NS/-4.41,-5.21				P. Oliveri
	Tgif MASO		NS/NS/NS/NS	NS/NS/NS/-1.74				Q. Tu, P. Oliveri & J. Yun
	Erg MASO		-1.83/NS/-2.17/NS/NS	NS/NS/NS/NS/NS				Q. Tu, P. Oliveri & J. Yun
elk	Dac MASO		+2.49/+2.24/+1.52/+1.46	(NS/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h])				I. Peter & J. Yun
	Blimp1b MASO		NS/NS/NS/NS/NS	(NS/NS/NS/NS/NS[24 h])(NS/-3.42/NS/NS/NS[27 h])				I. Peter & J. Yun
	Krl MASO		NS/NS/NS/NS	(NS/NS/NS/NS[24 h])(NS/-2.0/NS/NS[27 h])				I. Peter & J. Yun
	Bra MASO		+1.51/NS/+1.72/NS	(NS/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h])				I. Peter & J. Yun
	N MASO		NS/NS/NS	(NS/NS/NS/NS[24 h])(NS/-2.06/NS/NS[27 h])				I. Peter & J. Yun
	Myc MASO		+1.43/NS/NS/+2.49	(NS/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h])				I. Peter & J. Yun
	Otxa MASO		NS/+2.59/NS	(NS/NS/NS[24 h])(NS/NS/NS[27 h])				I. Peter
	Eve MASO	NS/NS	NS/NS/NS	(NS/NS/NS[24 h])(NS/-1.6/NS[27 h])				I. Peter
endo16	Otx-En	-1.6	-4.2	-3.1/-4.3/-6.6				A. Ransick & T. Minokawa
	GataE MASO		NS/NS/-2.6/NS/NS/NS/NS	(NS/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h])-2.8,-3.5/-2.7,-1.8	-2.3			P. Y. Lee, C. Yuh, I. Peter & J. Yun
	Hox11/13b MASO		-2.48/-1.75/NS	(NS/NS/-2.73[24 h])(NS/NS/-1.86[27 h])NS/+1.6/+2.3			NS	C. Arenas-Mena & I. Peter
	Krl MASO^18,26		-2.59/-2.57/NS/NS	(NS/NS/NS/-1.6[24 h])(NS/-2.01/NS/NS[27 h])-4.0,-3.3/-2.5,-2.5/NS				C. Livi, L. Chen, I. Peter & J. Yun
	Cad MOE¹⁰	-2.9/NS	-6.2/-2.3	-5.2/-2.2				A. Ransick & T. Minokawa
	FoxA MASO		NS/NS/NS/NS	(NS/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h])		-3.9,-2.7		K. Young, P. Oliveri, I. Peter & J. Yun
	N MASO		-1.71/NS/-1.46	(NS/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h])	-1.7 (29 h)			C. Calestani, I. Peter & J. Yun
	Soxb1 MOE²⁶		-4.5,-5.7	-7.6,-9.9				L. Chen
	Blimp1b MASO		NS/-3.97/-2.02/NS/-3.26	(-2.54/NS/-3.27/NS/-3.8[24 h])(NS/NS/-3.78/-3.88/-1.9[27 h])				I. Peter & J. Yun
	Bra MASO		-1.82/-2.22/-2.13/-2.4	(-2.01/NS/NS/NS[24 h])(NS/NS/-1.86/NS[27 h])				I. Peter & J. Yun
	Dac MASO		NS/-2.12/-2.93/-2.14	(NS/-1.97/NS/NS[24 h])(NS/NS/NS/NS[27 h])				I. Peter & J. Yun
	Eve MASO	NS/NS	NS/NS	(NS/NS/-1.86[24 h])(-2.16/-1.78/NS[27 h])				I. Peter
	OtxHD MASO		-1.99/-1.75/NS	(-2.03/NS/-2.08[24 h])(NS/NS/-1.97[27 h])				I. Peter
ephx	Bra MASO¹			-3.8				J. Rast
erg	Hex MASO		-2.16/NS/-1.94	NS/NS/-2.83				Q. Tu, P. Oliveri & J. Yun
	Ets1 MASO		-1.86/-1.77/-1.73/-2.25	-1.75/-1.99/-2.46/NS				Q. Tu, P. Oliveri & J. Yun
	Tbr MASO		NS/-1.55/-2.79	-2.19/NS/-3.19				Q. Tu, P. Oliveri & J. Yun
	FoxN2/3 MASO		NS/-2.22/NS	NS/NS/NS				Q. Tu, P. Oliveri & J. Yun
	Tgif MASO		-1.64/NS/-1.69/NS	NS/NS/NS/-1.76				Q. Tu, P. Oliveri & J. Yun
	Erg MASO		NS/NS/-2.37/NS/NS	NS/NS/NS/NS/NS				Q. Tu, P. Oliveri & J. Yun
ets1	Pmar1 MOE	NS		+5.4				P. Oliveri
	Pmar1-En	NS		+4.5				P. Oliveri
	Soxb1 MOE²⁶	NS,NS	-2.0,-1.9	-2.1,-2.1				L. Chen
	Snail MASO⁴⁸			NS/NS,NS/NS				S. Wu & D. McClay
	FoxN2/3 MASO		NS/+2.71/NS	NS/NS/NS				Q. Tu, P. Oliveri & J. Yun
	Ets1 MASO		NS/+1.8/NS/NS	NS/NS/NS/NS				Q. Tu, P. Oliveri & J. Yun
	Hex MASO		NS/+3.33/NS	NS/NS/+1.84				Q. Tu, P. Oliveri & J. Yun
	Erg MASO		+2.85/NS/+3.47/NS/NS	NS/NS/NS/NS/NS				Q. Tu, P. Oliveri & J. Yun
eve	Blimp1b MASO	-2.3,-3.0	-1.6,-1.7,-2.7,-2.3	NS/NS/NS				C. Livi, I. Peter & J. Yun
	Blimp1b-En	NS	-4.4,-4.3	-2.8,-4.3/-5.3				C. Livi
	Cad MOE	-6.3,-4.9/-3.9	-5.2,-4.0/-3.1	-5.5,-4.3/-4.6				A. Ransick & T. Minokawa
	Otx-En¹²			-2.9/NS				A. Ransick & T. Minokawa
	Soxb1 MASO²⁶	-2.0/NS,-2.0,-1.8/NS/-2.7		-2.1/NS	NS			C. Livi, J. Rast & K. Young
	Hox11/13b MASO		NS/NS/NS	(NS/NS/NS[24 h])(NS/NS/NS[27 h])NS/+1.9				C. Arenas-Mena & I. Peter
	Soxb1 MOE^{26, 41}	-2.1,-1.9	NS,-3.0	-4.1,-4.2				L. Chen
	Eve MASO	+2.8/NS/+3.45/+3.31	+2.0/NS/+2.58/+1.63/+2.39	(NS/+1.67/NS[24 h])(NS/NS/+1.64[27 h])NS/+2.2				A. Ransick, C. Livi & I. Peter
	Pmar1 MOE			-4.7				P. Oliveri & L. Vega
	Cad MOE			-3.7				P. Oliveri & L. Vega
	Pmar1 MOE + Cad MOE			-2.2				P. Oliveri & L. Vega
	Pmar1-En + Cad MOE			-6.7				P. Oliveri & L. Vega
	Pmar1-En			-7.9				P. Oliveri & L. Vega
	Brn1/2/4 MASO					-5.7/NS		C. Yuh
ferritin	Hox11/13b MASO			NS/NS/+2.1			NS	C. Arenas-Mena
ficolin	Bra MASO¹			-1.7				J. Rast
	Pmar1 MOE	+4.0		+5.9				P. Oliveri
	Pmar1-En	NS		+3.1				P. Oliveri
	Dri MASO	-3.6/NS/-2.7,-4.6	NS/NS/-1.8/-2.5/NS/NS/NS	NS/NS/NS				G. Amore, Q. Tu, P. Oliveri & J. Yun
	Dri-En		-4.6/-3.0					G. Amore
	Hnf6 MASO		-2.9/-3.9/-3.2/-3.4					O. Otim & G. Amore
	Gsc MASO³⁸		-2.9/-2.4	-2.2/-2.0				G. Amore
	Ets1 MASO		-2.56,-2.22/-2.77/-3.33/-1.81/-1.57/-2.36	-3.7/-2.0/-2.32,-3.62/NS/NS/-2.14/-3.92/-2.85				P. Oliveri, Q. Tu & J. Yun
	Soxb1 MOE²⁶			-2.2,-4.2/-1.8				L. Chen
	Soxb1-En			-5.0,-3.6				L. Vega & W. Chiu
	Alx1 MOE		NS,NS/+1.69	NS,-2.13/NS
	Ets1 MASO + Alx1 MOE		-5.0,-4.66/NS	-2.42,-3.73/-2.57				P. Oliveri
	Hex MASO		-2.99/NS/-2.68	NS/NS/-3.91				Q. Tu, P. Oliveri & J. Yun
	FoxN2/3 MASO		NS/-2.08/NS	NS/NS/NS				Q. Tu, P. Oliveri & J. Yun
	SoxC MASO		-1.68/NS	NS/NS				Q. Tu, P. Oliveri & J. Yun
	Tgif MASO		NS/NS/NS/NS	-1.64/NS/NS/NS				Q. Tu, P. Oliveri & J. Yun
	Alx1 MASO		-2.46/NS/NS	NS/NS/-2.08				Q. Tu, P. Oliveri & J. Yun
	Erg MASO		-3.31/-1.66/-5.47/NS/-1.73	NS/-1.79/-1.86/NS/NS				Q. Tu, P. Oliveri & J. Yun
foxa	GataE MASO		-2.1,-1.6/NS/NS,-1.8/-2.34/NS/NS/-2.35	(NS/-1.79/NS/NS[24 h])(NS/-1.57/-2.81/-2.24[27 h])-2.9,NS,-2.0/-3.4,-3.1/-2.6				P. Y. Lee, I. Peter & J. Yun
	FoxA MASO		NS/NS/NS/NS	(NS/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h])+2.3/NS,+1.6/+2.1	NS,+1.8	NS		P. Oliveri, I. Peter & J. Yun
	Cad MOE	NS,-2.0,NS/-2.2	NS,-4.1,-4.6/-2.1	-2.6,-5.0,-4.6/-4.9/-1.8				A. Ransick, T. Minokawa & C. Livi
	Dri MASO²		NS/NS/NS	NS/NS/-2.47/-2.41/NS	-2.3/-2.0/-2.0/-2.0/-3.0/-2.0/-2.0			G. Amore, Q. Tu, P. Oliveri & J. Yun
	GataC MASO			-2.7				P. Oliveri & J. Rast
	DnN MOE³		-2.5/NS					C. Calestani
	Elk-En⁴			-3.0,-3.7,-4.7				M. Arnone
	Gsc MASO²			NS/NS	-3.2/NS/-3.0/-3.0/-3.8/-3.0			G. Amore
	Otx-En		NS/NS/-2.8	-3.3/NS/-4.1/-2.8				A. Ransick & T. Minokawa
	Hox11/13b MASO		NS/-2.4/-1.64	(-2.64/-2.53/-1.92[24 h])(-1.88/NS/-2.48[27 h])+1.6/+1.6		NS		C. Arenas-Mena & I. Peter
	Soxb1 MOE²⁶		NS,-5.1	-5.0,-5.4				L. Chen
	Brn1/2/4 MASO					-4.4/NS/-3.7		C. Yuh
	Ets1 MASO⁴⁹		NS/-1.81/NS/-2.86	-1.78/-1.76/-1.88/-5.36				Q. Tu, P. Oliveri & J. Yun
	Tgif MASO		-2.64/-2.63/NS/NS/NS/NS	(-4.1/-2.72/NS/-1.95/NS/NS[24 h])(NS/NS/NS/NS[27 h])				Q. Tu, P. Oliveri, J. Yun & I. Peter
	Erg MASO⁴⁹		-2.47/-1.75/-2.02/NS/-2.95	-2.28/-3.62/-2.59/-2.29/NS				Q. Tu, P. Oliveri & J. Yun
	Dac MASO		NS/NS/NS/NS	(-3.13/NS/NS/-2.14[24 h])(NS/NS/NS/NS[27 h])				I. Peter & J. Yun
	Myc MASO		NS/NS/NS/NS	(NS/-2.2/NS/NS[24 h])(NS/NS/NS/NS[27 h])				I. Peter & J. Yun
	Bra MASO		-1.75/NS/NS/NS	(NS/-2.61/-1.69/-1.48[24 h])(NS/-1.48/NS/-2.11[27 h])				I. Peter & J. Yun
	Blimp1b MASO		NS/-2.39/NS/NS/NS	(-1.5/NS/NS/NS/-2.67[24 h])(-3.28/NS/-1.49/-1.9/-1.94[27 h])				I. Peter & J. Yun
	Krl MASO		NS/-2.29/NS/NS	(-2.03/-1.67/NS/NS[24 h])(NS/-1.67/NS/NS[27 h])				I. Peter & J. Yun
	Eve MASO	NS	NS/NS/+1.78	(NS/NS/NS[24 h])(NS/NS/NS[27 h])				I. Peter
	OtxHD MASO		-1.62/NS/NS	(-2.29/NS/NS[24 h])(NS/-2.24/NS[27 h])				I. Peter
foxb	Blimp1b-En²⁷		-5.0	-5.7				C. Livi
	GataE MASO		-2.8/-2.4/-3.4,-2.4/NS,+3.7/NS/NS/NS	(NS/NS/NS[24 h])(NS/NS/+1.75[27 h])-6.4,-4.4/-4.8,-5.2				P. Y. Lee, I. Peter & J. Yun
	FoxA MASO		NS/NS	(NS/NS[24 h])(NS/NS[27 h])NS,+1.9				P. Oliveri, I. Peter & J. Yun
	Cad MOE¹⁷		NS	-5.1/-3.3/-3.8				A. Ransick, T. Minokawa & C. Livi
	GataC MASO			-1.9²⁸				P. Oliveri & J. Rast
	Otx-En¹²			-6.4				T. Minokawa
	Eve MASO	NS	NS/NS	(NS/NS/NS[24 h])(NS/NS/NS[27 h])-5.3				A. Ransick & I. Peter
	FoxB MASO				+3.2/+4.1			T. Minokawa
	Pmar1 MOE			+5.7				T. Minokawa
	Pmar1-En			+4.9				T. Minokawa
	Alx1 MASO		-3.2,-2.0/-3.2/NS/NS/NS	-5.1,-4.7/-3.6/-1.97/-2.33/-4.83				P. Oliveri, Q. Tu & J. Yun
	Ets1 MASO		NS/NS/NS/NS	-11.5,-10.9/-4.2/-3.97,-4.71/-9.81/-3.1/-2.24/-4.07/-6.87/-4.75				P. Oliveri, Q. Tu & J. Yun
	Tbr MASO³³		-5.3/-2.6/NS/NS/NS	-4.9,-5.0/-2.7/-3.64/-2.59/-3.95				P. Oliveri, Q. Tu & J. Yun
	Soxb1 MOE²⁶		-2.4,-2.3	-3.2,-3.4				L. Chen
	Alx1 MOE			-1.95,-2.68/NS/NS				P. Oliveri
	Ets1 MASO + Alx1 MOE⁴⁷			-2.88,-3.62/-7.5/-4.03				P. Oliveri
	Dri MASO		NS/NS/NS	-2.57/-2.86/NS				Q. Tu, P. Oliveri & J. Yun
	Hex MASO		NS/NS/NS	NS/-7.74/NS				Q. Tu, P. Oliveri & J. Yun
	Tgif MASO		NS/NS/NS/NS/NS/NS/NS	(NS/-2.82/-2.17/NS/-1.84/NS/NS[24 h])(NS/NS/NS/NS[27 h])				Q. Tu, P. Oliveri, J. Yun & I. Peter
	Erg MASO		NS/NS/NS/NS/NS	NS/-4.43/-3.63/NS/+2.48				Q. Tu, P. Oliveri & J. Yun
	Bra MASO		NS/NS/NS/NS	(-2.38/-3.31/-2.1/-2.88[24 h])(-1.41/-3.89/NS/NS[27 h])				I. Peter & J. Yun
	Myc MASO		NS/NS/NS/NS	(NS/-2.02/-1.67/NS[24 h])(NS/NS/NS/NS[27 h])				I. Peter & J. Yun
	Krl MASO		NS/NS/NS/NS	(-3.7/-1.62/NS/NS[24 h])(NS/NS/NS/NS[27 h])				I. Peter & J. Yun
	Dac MASO		NS/NS/NS/NS	(NS/-2.84/-2.64/-2.07[24 h])(NS/NS/NS/NS[27 h])				I. Peter & J. Yun
	Blimp1b MASO		NS/NS/NS	(-4.57/NS/-1.76[24 h])(NS/NS/-3.73[27 h])				I. Peter & J. Yun
	Hox11/13b MASO		NS/-2.76/-1.73	(NS/NS/-2.19[24 h])(NS/NS/NS[27 h])				I. Peter
	OtxHD MASO		-2.96/-2.85/NS	(NS/NS/NS[24 h])(NS/NS/NS[27 h])				I. Peter
foxG	Dac MASO		NS/NS/-1.65	(-1.61/NS/NS[24 h])(NS/NS/NS[27 h])				I. Peter & J. Yun
	Tgif MASO		NS/NS/NS	(NS/NS/-1.84[24 h])(NS/NS/NS[27 h])				I. Peter & J. Yun
	Bra MASO		NS/NS/NS	(-2.13/NS/-2.13[24 h])(-2.04/NS/-3.43[27 h])				I. Peter & J. Yun
	Hox11/13b MASO		NS/NS/NS	(NS/NS/-1.8[24 h])(NS/NS/NS[27 h])				I. Peter
	OtxHD MASO		NS/-2.92/NS	(-2.7/NS/-2.46[24 h])(NS/-1.3/-2.08[27 h])				I. Peter
foxN2/3	Ets1 MASO		-1.78/NS/NS/NS	NS/NS/NS/NS				Q. Tu, P. Oliveri & J. Yun
	Hex MASO		NS/NS/NS	-1.82/NS/NS				Q. Tu, P. Oliveri & J. Yun
	Tgif MASO		NS/NS/NS/NS/NS/NS/NS/NS	(-1.74/NS/NS/-1.88/NS/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h])				Q. Tu, P. Oliveri, J. Yun & I. Peter
	Blimp1b MASO		NS/NS/NS/NS/NS	(-2.09/NS/-1.71/NS/NS[24 h])(NS/-2.95/NS/-1.42/NS[27 h])				I. Peter & J. Yun
	Otxa MASO		NS/+2.04/NS	(NS/NS/NS[24 h])(NS/NS/NS[27 h])				I. Peter
	Hox11/13b MASO		NS/NS/NS	(NS/NS/-2.01[24 h])(-1.62/NS/-1.75[27 h])				I. Peter
	Eve MASO	NS/NS	NS/NS/NS	(NS/NS/-1.91[24 h])(NS/-1.94/NS[27 h])				I. Peter
foxO	Hex MASO		NS/NS	-1.91/-3.31				Q. Tu, P. Oliveri & J. Yun
	Ets1 MASO		NS/NS/NS/-1.81	NS/NS/-1.87/-1.92				Q. Tu, P. Oliveri & J. Yun
	Tgif MASO		NS/NS/NS/NS	NS/-2.04/-2.5/-1.94				Q. Tu, P. Oliveri & J. Yun
	FoxN2/3 MASO		NS/NS/NS	NS/-1.71/NS				Q. Tu, P. Oliveri & J. Yun
	Dri MASO		NS/NS/NS	-1.89/NS/NS				Q. Tu, P. Oliveri & J. Yun
	Erg MASO		NS/-1.94/NS/-1.84/-3.59	NS/-3.62/-2.95/-2.32/NS				Q. Tu, P. Oliveri & J. Yun
foxP	Tgif MASO		NS/NS/NS/NS	(NS/-1.98/NS/NS[24 h])(NS/NS/NS/-2.23[27 h])				I. Peter & J. Yun
	Blimp1b MASO		NS/NS/NS/NS/NS	(NS/NS/NS/-1.89/NS[24 h])(-2.04/NS/NS/NS[27 h])				I. Peter & J. Yun
	Dac MASO		-1.69/NS/NS/NS	(NS/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h])				I. Peter & J. Yun
	Bra MASO		-2.45/-1.6/NS/-1.41	(NS/-2.39/NS/NS[24 h])(NS/-2.49/NS/-1.71[27 h])				I. Peter & J. Yun
	GataE MASO		NS/NS/NS/NS	(NS/NS/-1.64/NS[24 h])(-1.74/NS/NS/NS[27 h])				I. Peter & J. Yun
	Hox11/13b MASO		NS/NS/NS	(NS/NS/NS[24 h])(NS/-1.75/NS[27 h])				I. Peter
	Eve MASO	NS/NS	NS/NS/NS	(NS/NS/NS[24 h])(-1.81/NS/NS[27 h])				I. Peter
fvmo1³⁴	DnN MOE⁷	-1.6	-4.2/-3.5/-2.5/-2.6					C. Calestani
	Gcm MASO			-4.2				A. Ransick
	N MASO		-2.2		-1.7 (29 h)	-3.6		C. Calestani
	GataE MASO			-3.5/-1.9,-2.1				P. Y. Lee
fvmo2³⁴	DnN MOE	NS	-2.5/-2.5					C. Calestani
fvmo2³⁴	N MASO		-1.9		-1.8 (29 h)	-2.6		C. Calestani
fvmo3³⁴	DnN MOE	-2.6	-2.2/-3.2					C. Calestani
fvmo3³⁴	N MASO		-2.4		-2.0 (29 h)	-3.1		C. Calestani
G-cadherin⁴⁸	Pmar1 MOE			-3.45,NS/-3.48				S. Wu & D. McClay
G-cadherin⁴⁸	Pmar1 MOE + Snail MASO			NS,NS/NS				S. Wu & D. McClay
gatac	Cad MOE³¹		-2.4/NS	-6.4/-3.6/-4.9				A. Ransick, T. Minokawa & C. Livi
	Elk-En			-6.0,-5.2,-5.7				M. Arnone
	Otx-En²¹			-2.1/-3.3				A. Ransick & T. Minokawa
	GataE MASO¹⁴		NS/NS/NS/NS/NS/NS/NS/NS/NS	(+1.69/NS/NS/NS[24 h])(NS/+2.17/+2.74/+2.2[27 h])-2.2,-2.5/NS,NS/-2.4,-2.5				P. Y. Lee, I. Peter & J. Yun
	Dri MASO⁴⁹		-2.1/-2.3/NS/NS	-2.87/-2.88/-2.43	NS/NS			G. Amore, Q. Tu, P. Oliveri & J. Yun
	N MASO³⁰		(NS/NS/NS[18 h])(-2.77[21 h])-2.6	(-2.77/-2.34/-3.17/-2.91/-5.4[24 h])(-2.37/-4.69/-2.87/-4.11/-2.67[27 h])	NS (29 h)	NS		C. Calestani, Pei-yun Lee, I. Peter & J. Yun
	GataC MASO			+3.1,+3.7/NS				P. Oliveri
	Hnf6 MASO		-2.5/-3.0/-2.8/-6.2/-3.1/-3.4		+2.0/+3.0			G. Amore & O. Otim
	Gcm MASO³²		-2.2	-2.5				A. Ransick
	Soxb1 MOE²⁶			-2.9,-2.9				L. Chen
	Gsc MASO³⁷			-3.6/-2.9				G. Amore
	MutantSu(H) MOE		NS	-2.7	NS			Pei-yun Lee
	FoxA MASO		NS/NS/NS/NS/NS	(NS/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h])NS/+2.2		NS/NS		P. Oliveri, I. Peter & J. Yun
	Ets1 MASO		NS/NS/NS/NS	NS/-1.81/NS/NS				Q. Tu, P. Oliveri & J. Yun
	Hex MASO		NS/NS	NS/-2.91				Q. Tu, P. Oliveri & J. Yun
	Erg MASO		NS/NS/NS/NS/NS	NS/-3.08/-2.96/NS/NS				Q. Tu, P. Oliveri & J. Yun
	Blimp1b MASO		NS/NS/NS/NS/NS	(NS/-1.78/-2.47/NS/-1.83[24 h])(NS/NS/NS/-2.27/NS[27 h])				I. Peter & J. Yun
	Bra MASO		NS/NS/NS/NS	(NS/NS/NS/NS[24 h])(+1.87/NS/NS/NS[27 h])				I. Peter & J. Yun
	Hox11/13b MASO		NS/-3.63/-2.27	(NS/NS/-1.89[24 h])(NS/NS/-2.04[27 h])				I. Peter
	OtxHD MASO		-4.09/-3.73/NS	(NS/NS/NS[24 h])(NS/NS/NS[27 h])				I. Peter
gatae	Cad MOE	NS/NS	-5.1/-3.1	-4.7/-3.6/-3.1				A. Ransick, T. Minokawa & C. Livi
	DnN MOE		-2.4/NS					C. Calestani
	Otx-En		-3.3,-2.2/-2.8,-3.0/-3.2	NS/NS,-2.4/-2.4/-4.1/-2.4				A. Ransick & T. Minokawa
	Soxb1 MOE²⁶		-1.6,-3.8	-4.1,-4.2				J. Rast & K. Young
	Soxb1-En			-6.0,-3.5				L. Vega & W. Chiu
	FoxA MASO		NS/NS/NS/NS	(NS/NS/NS[24 h])(NS/NS/NS[27 h])NS/NS		-2.8,-1.6/-2.5/-8.5		P. Oliveri, I. Peter & J. Yun
	Hnf6 MASO				NS/NS/NS/NS/NS	-2.1/-2.6/-2.7/NS/NS		G. Amore & O. Otim
	Eve MASO	NS/NS	NS/NS/NS	(NS/NS/-2.72[24 h])(-2.3/-2.41/-1.98[27 h])-2.6				A. Ransick & I. Peter
	Hox11/13b MASO		-1.74/NS/NS	(-1.63/NS/-2.62[24 h])(-1.7/-2.16/-1.7[27 h])+2.4/+1.7			NS	C. Arenas-Mena & I. Peter
	N MASO		(NS/NS/NS[18 h])(NS[21 h])	(NS/NS/NS/NS/NS[24 h])(NS/NS/NS/NS/NS[27 h])	-2.84 (37 h)			Pei-yun Lee, I. Peter & J. Yun
	MutantSu(H) MOE		-2.2/NS/-1.68/NS/NS/-2.52	NS/NS/NS/-1.88/NS/NS	NS/NS/NS/NS/NS/NS			Pei-yun Lee
	Dac MASO		NS/-1.51/NS/-2.73	(NS/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h])				I. Peter & J. Yun
	Tgif MASO		NS/NS/NS/NS	(NS/NS/NS/NS[24 h])(NS/NS/NS/-1.63[27 h])				I. Peter & J. Yun
	Bra MASO		-3.29/-3.11/NS/-2.02	(NS/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h])				I. Peter & J. Yun
	Blimp1b MASO		-2.2/NS/NS/NS	(NS/NS/NS/NS[24 h])(-1.8/NS/NS/NS[27 h])				I. Peter & J. Yun
gcm	Cad MOE	-6.3,-5.1,-5.2/-3.3	-5.2,-6.1,-4.6/-4.3	-5.0,-5.7/-5.5				A. Ransick & T. Minokawa
	DnN MOE		-3.5/-2.1,-3.1					C. Calestani
	Gcm MASO	-1.9		-2.0/-3.5				A. Ransick
	Elk-En			-4.3,-3.0,-6.4				M. Arnone
	N MASO		(-5.36/-5.03/-4.29[18 h])(-3.68[21 h])-2.4	(-3.69/-4.28/-5.75/-4.61/-5.39[24 h])(-4.09/-4.43/-3.86/-4.74/-6.32[27 h])	-2.6/-2.3 (29 h)/-4.93 (37 h)	-2.4		C. Calestani, Pei-yun Lee, I. Peter & J. Yun
	FoxA MASO		NS/NS/NS/NS/NS	(NS/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h])NS,NS/+3.2/NS	+2.2,+1.6/+3.2,+3.0	NS/NS		P. Oliveri, I. Peter & J. Yun
	Soxb1 MOE²⁶	NS	-3.5,-5.1	-4.1,-3.2				L. Chen
	Hnf6 MASO				+2.2/NS			G. Amore & O. Otim
	MutantSu(H) MOE		-2.6/-4.0	-3.3/---	-3.4/-4.0			Pei-yun Lee
	Tgif MASO		NS/NS/NS/NS/NS/NS/NS/NS	(NS/NS/NS/-1.72/NS/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h])				Q. Tu, P. Oliveri, J. Yun & I. Peter
	Blimp1b MASO		NS/-3.2/NS/NS/NS	(NS/-1.6/NS/NS/-3.93[24 h])(NS/NS/NS/-1.86/-3.73[27 h])				I. Peter & J. Yun
	Hox11/13b MASO		NS/NS/NS	(NS/NS/-3.9[24 h])(NS/NS/-2.05[27 h])				I. Peter
	Eve MASO	NS/-3.65	NS/NS	(NS/NS/NS[24 h])(-2.23/NS/NS[27 h])				I. Peter
gsc	Dri MASO	-5.0/-7.0	-7.0/-8.6/-4.0/-2.9/NS/-1.88/-1.7	-3.23/-3.96/-2.15	-2.6/-4.5			G. Amore, Q. Tu, P. Oliveri & J. Yun
	Dri-En		-3.6/-2.7					G. Amore
	Alx1 MASO		-3.6,-2.5/NS/NS/NS/NS/NS	NS/NS/NS/NS/NS				P. Oliveri, Q. Tu & J. Yun
	Soxb1 MOE²⁶		-4.0,-9.1	-6.7,-4.8				L. Chen
	Soxb1-En			-3.3,-1.9				L. Vega & W. Chiu
	Pmar1 MOE			-13.3				P. Oliveri & L. Vega
	Cad MOE			-6.5				P. Oliveri & L. Vega
	Pmar1-En			-6.6				P. Oliveri & L. Vega
	Hnf6 MASO		-6.1/-4.9/-6.0					G. Amore & O. Otim
	GataE MASO⁴⁵			-5.0,-4.8/-4.0,-4.1				P. Y. Lee
	Tel MASO		NS/NS/-1.95	NS/NS/NS				Q. Tu, P. Oliveri & J. Yun
	FoxN2/3 MASO		NS/NS/NS	NS/-2.15/NS				Q. Tu, P. Oliveri & J. Yun
	Tbr MASO		-1.64/NS	NS/NS				Q. Tu, P. Oliveri & J. Yun
	SoxC MASO		-9.71/NS	NS/NS				Q. Tu, P. Oliveri & J. Yun
	Tgif MASO⁴⁹		NS/NS/-2.88/NS	-3.0/-2.79/-3.19/-3.25				Q. Tu, P. Oliveri & J. Yun
	Ets1 MASO⁴⁹		NS/NS/-2.71/-2.02	-2.48/-3.1/NS/-8.93				Q. Tu, P. Oliveri & J. Yun
	Erg MASO⁴⁹		-2.68/NS/-2.78/-2.01/-2.46	NS/-2.98/-2.41/-1.76/NS				Q. Tu, P. Oliveri & J. Yun
hex	Ets1 MASO		-4.02/-5.21/-2.61/-3.8	NS/-1.86/-3.39/-1.99				Q. Tu, P. Oliveri & J. Yun
	Tgif MASO		NS/NS/-1.86	NS/-1.88/-2.19				Q. Tu, P. Oliveri & J. Yun
	Dri MASO		NS/NS/NS	-1.77/NS/NS				Q. Tu, P. Oliveri & J. Yun
	Hex MASO		-1.65/-2.1	NS/-3.85				Q. Tu, P. Oliveri & J. Yun
	Erg MASO		-1.63/NS/-4.19/-1.71/NS	NS/NS/NS/NS/NS				Q. Tu, P. Oliveri & J. Yun
hh	FoxA MASO		NS/NS/NS/NS	(NS/NS/NS/NS[24 h])(-4.52/-8.1/-6.0/-3.09[27 h])	-2.5/-2.3	-3.3/-2.7		P. Oliveri, I. Peter & J. Yun
	Tgif MASO		NS/NS/NS/NS	(NS/NS/NS/NS[24 h])(NS/-1.72/-2.15/-2.01[27 h])				I. Peter & J. Yun
	Blimp1b MASO		NS/NS/NS/NS/NS	(NS/NS/NS/NS/NS[24 h])(-4.7/NS/-3.0/-1.45/NS[27 h])				I. Peter & J. Yun
	Krl MASO		NS/NS/NS/NS	(NS/NS/NS/NS[24 h])(-2.06/-8.5/NS/-1.67[27 h])				I. Peter & J. Yun
	GataE MASO		NS/NS/NS/NS	(NS/NS/NS/NS[24 h])(-3.8/-2.19/-5.02/-3.54[27 h])				I. Peter & J. Yun
	Dac MASO		NS/NS/NS/NS	(NS/NS/NS/NS[24 h])(NS/-5.76/-1.87/-3.21[27 h])				I. Peter & J. Yun
	Myc MASO		NS/NS/NS/NS	(NS/NS/NS/NS[24 h])(-2.53/NS/NS/-2.67[27 h])				I. Peter & J. Yun
	Bra MASO		NS/NS/NS/NS	(NS/NS/NS/NS[24 h])(NS/-2.2/-3.44/NS[27 h])				I. Peter & J. Yun
	Hox11/13b MASO		NS/NS/NS	(NS/NS/NS[24 h])(-3.74/-2.91/NS[27 h])				I. Peter
	Otxa MASO		NS/NS	(NS/-1.67[24 h])(NS/NS/NS[27 h])				I. Peter
	Eve MASO	NS	NS/NS	(NS/-1.96[24 h])(NS/-3.25/NS[27 h])				I. Peter
	OtxHD MASO		NS/NS/NS	(NS/NS/NS[24 h])(NS/-3.53/-3.75[27 h])				I. Peter
hnf1	GataE MASO		-2.03/-2.48/NS/-3.74	(NS/NS/-3.47/-2.29[24 h])(-3.48/NS/-3.44/NS[27 h])				I. Peter & J. Yun
	Bra MASO		NS/-3.42/NS/-2.74	(-2.1/-2.5/-1.54/-2.37[24 h])(-3.7/-1.85/-2.08/NS[27 h])				I. Peter & J. Yun
	Krl MASO		NS/NS/NS/-1.97	(NS/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h])				I. Peter & J. Yun
	Tgif MASO		-2.11/NS/NS/-2.26	(NS/NS/NS/-1.65[24 h])(NS/NS/NS/-2.09[27 h])				I. Peter & J. Yun
	Myc MASO		NS/NS/-2.34/-2.89	(-1.41/NS/-2.92/NS[24 h])(-2.21/NS/NS/NS[27 h])				I. Peter & J. Yun
	N MASO		+1.69/NS/NS	(+2.63/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h])				I. Peter & J. Yun
	Dac MASO		-2.5/NS/-3.28/NS	(NS/NS/-2.5/NS[24 h])(NS/NS/-1.91/NS[27 h])				I. Peter & J. Yun
	Blimp1b MASO		-3.86/-2.11/NS/NS/NS	(NS/-1.95/-1.5/NS/NS[24 h])(-1.81/-2.74/NS/-1.63/NS[27 h])				I. Peter & J. Yun
	Otxa MASO		-3.68/NS/-3.4	(NS/NS/NS[24 h])(NS/NS/NS[27 h])				I. Peter
	Hox11/13b MASO		NS/NS/NS	(-1.63/NS/-2.43[24 h])(-2.28/-1.97/-1.72[27 h])				I. Peter
	Eve MASO	NS/NS	-2.98/-3.81/NS	(-2.44/-1.96/-3.34[24 h])(-3.19/-3.05/-2.26[27 h])				I. Peter
	OtxHD MASO		NS/-2.25/NS	(NS/NS/NS[24 h])(NS/NS/NS[27 h])				I. Peter
	Hnf1 MASO			(NS/NS/NS[24 h])(NS/+1.45/+1.93[27 h])				I. Peter
hnf6	Tbr MASO		NS/NS	NS,+1.9/NS/NS				P. Oliveri, K. Young, Q. Tu & J. Yun
	Tgif MASO⁴⁹		NS/NS/NS/NS/NS	(NS/-2.67/-2.19/-1.95/NS[24 h])(NS/-1.7[27 h])				Q. Tu, P. Oliveri, J. Yun & I. Peter
	Ets1 MASO		NS/NS/NS/NS	NS/NS/-2.09/NS				Q. Tu, P. Oliveri & J. Yun
	Hex MASO		NS/NS	-1.85/NS				Q. Tu, P. Oliveri & J. Yun
	Erg MASO		NS/NS/NS/-3.46/-1.66	NS/-1.81/-1.76/-1.93/NS				Q. Tu, P. Oliveri & J. Yun
	Dac MASO		+1.68/NS	(NS/NS[24 h])(NS/NS[27 h])				I. Peter & J. Yun
	Bra MASO		NS/-2.22	(NS/NS[24 h])(NS/NS[27 h])				I. Peter & J. Yun
	Otxa MASO		+2.4/NS	(NS/NS/NS[24 h])(NS/NS/NS[27 h])				I. Peter
	Eve MASO	NS	NS/+1.6	(NS/NS/-1.87[24 h])(-2.93/-2.5/NS[27 h])				I. Peter
	Hnf1 MASO			(NS/NS/NS[24 h])(NS/NS/+1.61[27 h])				I. Peter
hox11/13b	Blimp1b-En	-7.6	-6.2	-3.2				C. Livi
	Cad MOE	-5.4	-5.6/-2.7	-5.2/-3.1				A. Ransick & T. Minokawa
	Otx-En		-4.8/-4.3/-6.5	-3.0/-4.3/-6.6/-8.8				A. Ransick & T. Minokawa
	Soxb1 MOE²⁶	-2.4,-2.3	-1.8,NS	NS,NS/NS				L. Chen
	Eve MASO	NS/NS/NS	-1.8/-1.8/NS/NS/NS	(-1.89/-1.62/-2.48[24 h])(-1.95/-2.0/-2.04[27 h])-2.8/-2.1				A. Ransick, C. Livi & I. Peter
	GataE MASO		NS/NS/NS	(+1.79/NS/NS[24 h])(NS/NS/NS[27 h])				I. Peter & J. Yun
	Dac MASO		NS/NS/NS/NS	(NS/NS/NS/NS[24 h])(NS/NS/NS/+2.17[27 h])				I. Peter & J. Yun
	N MASO		NS/+1.77/NS	(NS/-1.77/NS/NS[24 h])(NS/NS/NS/NS[27 h])				I. Peter & J. Yun
	Myc MASO		NS/NS/NS/NS	(NS/NS/NS/NS[24 h])(+1.62/+1.52/NS/NS[27 h])				I. Peter & J. Yun
	Bra MASO		NS/NS/NS/NS	(NS/NS/NS/NS[24 h])(NS/NS/+1.42/+1.98[27 h])				I. Peter & J. Yun
	Krl MASO		NS/NS/NS/NS	(NS/NS/+1.77/+1.98[24 h])(NS/NS/NS/NS[27 h])				I. Peter & J. Yun
	Hox11/13b MASO		NS/NS/NS	(+2.31/+2.82/NS[24 h])(+2.38/+2.59/+1.22[27 h])				I. Peter
hsp70	Hox11/13b MASO			NS/+1.6				C. Arenas-Mena
jun	Dri MASO		NS/+1.66/NS	NS/NS/NS				Q. Tu, P. Oliveri & J. Yun
jun	Erg MASO		NS/NS/NS/-5.32/NS	NS/NS/NS/NS/NS				Q. Tu, P. Oliveri & J. Yun
krl	Cad MOE	-9.9,-10.8		-4.9				P. Oliveri & K. Young
	Pmar1 MOE	NS,NS		-2.1,-2.5				P. Oliveri & K. Young
	Pmar1-En	NS,NS		NS,NS				P. Oliveri & K. Young
	Pmar1 MOE + Cad MOE	-6.3,-7.4		-2.5				P. Oliveri & K. Young
	Pmar1-En + Cad MOE	-6.1,-5.2		NS				P. Oliveri & K. Young
	Hnf6 MASO		NS/-2.1/NS/-1.9/NS		+2.9/+3.5/+2.0/+3.4/+5.2			G. Amore & O. Otim
	Soxb1 MOE²⁶	-2.9,-2.9	-3.8,-4.0	-3.3,-3.1/NS				L. Chen
	Tbr MASO		NS/NS	+2.66/NS				Q. Tu, P. Oliveri & J. Yun
	Dri MASO		NS/NS/NS	NS/+1.97/NS				Q. Tu, P. Oliveri & J. Yun
	Tgif MASO		NS/NS/NS/NS/NS/NS/NS	(+2.54/NS/NS/NS/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h])				Q. Tu, P. Oliveri, J. Yun & I. Peter
	Alx1 MASO		NS/NS/NS	+2.21/+1.81/NS				Q. Tu, P. Oliveri & J. Yun
	Erg MASO		NS/NS/NS/NS/NS	+2.41/NS/NS/NS/+2.36				Q. Tu, P. Oliveri & J. Yun
	GataE MASO		NS/NS/NS/NS	(NS/+2.46/+2.85/+1.68[24 h])(+4.58/+2.82/+2.9/+1.43[27 h])				I. Peter & J. Yun
	Blimp1b MASO		NS/-1.65/NS/NS/NS	(NS/NS/NS/NS/+2.01[24 h])(+1.82/+2.64/+1.6/+2.0/NS[27 h])				I. Peter & J. Yun
	Dac MASO		NS/NS/NS/NS	(NS/NS/NS/NS[24 h])(NS/+1.48/+2.97/+1.79[27 h])				I. Peter & J. Yun
	Bra MASO		NS/NS/NS/NS	(NS/NS/+1.94/NS[24 h])(NS/+1.82/+3.03/+3.01[27 h])				I. Peter & J. Yun
	Myc MASO		NS/NS/NS/NS	(NS/NS/NS/NS[24 h])(NS/+2.03/NS/+2.46[27 h])				I. Peter & J. Yun
	N MASO		NS/NS/NS	(-2.51/-1.65/NS/NS[24 h])(NS/NS/NS/NS[27 h])				I. Peter & J. Yun
	FoxA MASO		NS/NS/NS/NS	(NS/+1.6/NS/NS[24 h])(+2.15/+1.56/+1.94/NS[27 h])				I. Peter & J. Yun
	Eve MASO	NS/NS	NS/NS/NS	(NS/NS/NS[24 h])(-1.77/NS/NS[27 h])				I. Peter
	Hox11/13b MASO		NS/NS/NS	(-1.71/NS/-1.79[24 h])(NS/NS/-1.64[27 h])				I. Peter
	Otxa MASO		NS/NS/NS	(NS/+1.77/NS[24 h])(NS/NS/+2.54[27 h])				I. Peter
lim1	GataE MASO		-1.6/-2.3,-1.9/NS,NS/NS,NS	-2.6,-2.2/-2.3,-2.3				P. Y. Lee
	Cad MOE	NS	-2.5/NS	-5.0/NS				A. Ransick & T. Minokawa
	Elk-En⁶			-6.3,-3.7,-6.5				M. Arnone
	Soxb1 MASO²⁶	-2.9		-2.3	NS			C. Livi
	Otx-En		-2.5/NS	-3.3/-5.4				A. Ransick & T. Minokawa
msp130	Dri MASO		-3.6/-5.1/-2.1/-2.4/-2.0/-2.5/-3.0/NS/-1.95/NS	NS/NS/NS				G. Amore, Q. Tu, P. Oliveri & J. Yun
	Cad MOE¹⁹			-5.3				C. Livi
	Dri-En		-3.6/-1.9					G. Amore
	Pmar1 MASO	+3.1		+6.4				P. Oliveri
	Pmar1-En	+1.6		+4.7				P. Oliveri
	Krl MASO²⁶	-2.4²³,-2.1²³/-4.8,-3.3/-4.9,-2.8	-2.2/-1.7,-2.7/NS	-1.9,-2.7/NS				J. Rast & K. Young
	Hnf6 MASO		-2.8/-2.2/-2.7/-3.0/-3.4/NS/-1.8			NS/NS		O. Otim & G. Amore
	FoxB MASO			-1.7	-2.0			T. Minokawa
	Ets1 MASO		-3.3/-4.3/NS/-5.63/-8.84/-5.66/-3.42/-6.02	-4.3/-5.05/-2.48/-5.42/-4.58/-6.4/-4.81				P. Oliveri, L. Vega, Q. Tu & J. Yun
	Alx1 MASO⁴³		-2.9,-3.1/-2.4/NS/-3.73/-2.41/-4.09	-1.8/-2.1/-3.07/-2.33/-4.49				P. Oliveri, L. Vega, Q. Tu & J. Yun
	Gsc MASO³⁸		-3.2,NS	-2.2/-3.7				G. Amore
	Soxb1 MOE²⁶			-8.4,-8.9/-2.8,-1.6				L. Chen
	Alx1 MOE		NS/NS	NS/NS				P. Oliveri
	Ets1 MASO + Alx1 MOE⁴⁷		NS/-3.91	-3.23/-4.54				P. Oliveri
	Hex MASO		-4.08/-1.57/-3.33	-2.0/NS/-4.88				Q. Tu, P. Oliveri & J. Yun
	Tgif MASO		-2.87/-1.84/-2.62	NS/-2.92/-2.57				Q. Tu, P. Oliveri & J. Yun
	Tbr MASO		NS/NS	-1.73/NS				Q. Tu, P. Oliveri & J. Yun
	SoxC MASO		-2.02/NS	NS/NS				Q. Tu, P. Oliveri & J. Yun
	Erg MASO		-4.86/-2.0/-6.21/-3.07/-2.52	NS/-3.25/-2.79/-1.61/NS				Q. Tu, P. Oliveri & J. Yun
msp130-like	Bra MASO¹			-4.3				J. Rast
	Pmar1 MOE	+3.2		+5.8				P. Oliveri
	Pmar1-En	+2.4		+4.9				P. Oliveri
	Alx1 MASO		-4.7/-3.1/-3.5/NS	NS/NS				P. Oliveri
	Ets1 MASO		-2.3/-5.58,-5.29/-2.08	-2.8/-5.42,-5.6/-13.23/-3.47				P. Oliveri
	Alx1 MOE		-2.29,-1.99/NS	-2.38,-2.55/NS/NS				P. Oliveri
	Ets1 MASO + Alx1 MOE⁴⁷		-6.35,-6.06/-2.52	-5.72,-5.89/-5.77/-3.99				P. Oliveri
	Hex MASO		-3.05/-1.67	NS/-4.14				Q. Tu, P. Oliveri & J. Yun
	Ets1 MASO		-8.56/-8.38/-3.29/-6.36	-6.39/-5.15/-7.49/-7.91				Q. Tu, P. Oliveri & J. Yun
	Alx1 MASO		-4.4/-2.83/-3.95	-2.83/-2.11/-4.65				Q. Tu, P. Oliveri & J. Yun
	Tgif MASO		-2.06/-1.69/NS/-1.85	-1.6/-2.21/-2.07/-1.72				Q. Tu, P. Oliveri & J. Yun
	Erg MASO		-2.07/NS/-2.6/-2.06/-2.2	NS/-1.61/NS/NS/NS				Q. Tu, P. Oliveri & J. Yun
msx	GataE MASO		NS/NS/NS/NS	(NS/NS/-3.51/-2.45[24 h])(-3.32/NS/-3.69/NS[27 h])				I. Peter & J. Yun
	Dac MASO		NS/NS/NS/NS	(-3.09/NS/-3.21/-1.69[24 h])(NS/NS/NS/NS[27 h])				I. Peter & J. Yun
	N MASO		NS/NS/NS	(+3.12/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h])				I. Peter & J. Yun
	Bra MASO		NS/NS/NS/NS	(-1.53/-3.04/-1.79/NS[24 h])(NS/-2.0/NS/-1.62[27 h])				I. Peter & J. Yun
	Myc MASO		NS/NS/NS/NS	(NS/-1.95/NS/NS[24 h])(NS/NS/NS/NS[27 h])				I. Peter & J. Yun
	Otxa MASO		-1.94	(NS[24 h])(NS[27 h])				I. Peter
myc	Myc MASO		+1.6/NS/+1.95/NS	(+1.56/+1.52/NS/+1.71[24 h])(NS/+1.71/+2.09/+1.69[27 h])				I. Peter & J. Yun
	Blimp1b MASO		NS/NS/NS/NS/NS	(NS/NS/NS/NS/NS[24 h])(-2.05/NS/NS/NS/NS[27 h])				I. Peter & J. Yun
	GataE MASO		-1.48/NS/-1.84/NS	(NS/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h])				I. Peter & J. Yun
	Hox11/13b MASO		NS/NS/NS	(NS/NS/NS[24 h])(NS/NS/-1.75[27 h])				I. Peter
not	GataE MASO		-1.9,NS/NS/NS,NS	-2.2,-2.1/-2.4,-2.3				P. Y. Lee
	Otx-En	-3.6	-5.0	-2.1/-3.3				A. Ransick & T. Minokawa
	GataC MASO			-1.7/NS				P. Oliveri & J. Rast
	Tgif MASO⁴⁹		NS/NS/NS	-3.32/-2.16/-1.97				Q. Tu, P. Oliveri & J. Yun
	Ets1 MASO		NS/NS/NS/NS	NS/NS/-2.87/NS				Q. Tu, P. Oliveri & J. Yun
	Hex MASO		NS/+1.74	NS/NS				Q. Tu, P. Oliveri & J. Yun
	Erg MASO		NS/NS/NS/NS/NS	NS/NS/-1.72/NS/NS				Q. Tu, P. Oliveri & J. Yun
notch	GataE MASO		NS/NS/NS	(NS/NS/NS[24 h])(NS/NS/-1.79/-1.53[27 h])				I. Peter & J. Yun
	N MASO		+1.87/NS/+1.49	(NS/NS/+2.49/NS[24 h])(NS/NS/NS/NS[27 h])				I. Peter & J. Yun
	Hox11/13b MASO		NS/NS/NS	(NS/NS/NS[24 h])(NS/NS/-1.64[27 h])				I. Peter
	Otxa MASO		NS/+1.86/NS	(NS/NS/NS[24 h])(NS/NS/NS[27 h])				I. Peter
nrl	GataE MASO		+2.3,NS/+1.8,+2.7	+2.1,+1.6,NS/+2.3,+1.8				P. Y. Lee
	Bra MASO¹			+2.4,+4.3				J. Rast
	Otx-En³		NS	+3.5				A. Ransick & T. Minokawa
	Tbr MASO		-2.2,-3.4,-3.4,-2.7/-1.8/-2.4/NS/NS/NS	NS/NS/+2.31/NS/NS				P. Oliveri, Q. Tu & J. Yun
	Alx1 MASO		-1.8/-2.7/NS/NS	NS/NS/NS/NS				P. Oliveri, L. Vega, Q. Tu & J. Yun
	Pmar1 MOE	+2.4		+4.5				P. Oliveri & L. Vega
	Cad MOE	+3.6		+2.6				P. Oliveri & L. Vega
	Pmar1-En	+3.4		+2.3				P. Oliveri & L. Vega
	FoxN2/3 MASO		NS/-2.25/-2.01	NS/+1.91/NS				Q. Tu, P. Oliveri & J. Yun
	Tgif MASO		NS/-1.7/-1.82/+1.78	+1.57/+3.92/NS/+3.83				Q. Tu, P. Oliveri & J. Yun
	Tel MASO		NS/NS/-2.31	+1.75/+1.6/NS				Q. Tu, P. Oliveri & J. Yun
	Ets1 MASO		NS/+2.13/NS	+1.77/+3.66/NS				Q. Tu, P. Oliveri & J. Yun
	Hex MASO		NS/NS/NS	NS/NS/+2.28				Q. Tu, P. Oliveri & J. Yun
	Erg MASO		NS/-2.4/NS/-2.09/-2.54	NS/NS/NS/NS/NS				Q. Tu, P. Oliveri & J. Yun
otx3	Blimp1b MASO	-3.8,-3.0	-1.8,-2.1,-2.3,-2.3					C. Livi
otxb1/2	Blimp1b MASO	-2.7,-2.1	-2.1,-1.9/NS/NS/-1.73/NS/NS/NS	(NS/NS/NS/NS/-1.67[24 h])(-2.12/NS/NS/NS/NS[27 h])-2.3/-2.7				C. Livi, I. Peter & J. Yun
	Blimp1b-En	-5.6	-4.6	-3.6				C. Livi
	GataE MASO		-2.5,-3.1/-3.6,-3.6/-1.86/NS/NS/NS	(-1.41/-1.74/-1.91/-1.49[24 h])(-1.65/-2.64/NS/-1.72[27 h])-1.8,NS,NS/-3.0,-3.7				P. Y. Lee, I. Peter & J. Yun
	Cad MOE	NS	+10.3/+1.7	NS/NS				A. Ransick & T. Minokawa
	Otx-En	-3.8/-3.7	-3.2/-4.1/-3.3	-2.1/-2.3/-3.2/-3.8				A. Ransick & T. Minokawa
	Tgif MASO		NS/NS/NS/NS	(NS/NS/-1.9/-1.63[24 h])(NS/-1.49/NS/-1.81[27 h])				I. Peter & J. Yun
	Dac MASO		NS/NS/NS/NS	(-2.13/NS/NS/-2.47[24 h])(-1.92/NS/-1.64/NS[27 h])				I. Peter & J. Yun
	N MASO		NS/+2.02/NS	(NS/+3.55/NS/NS[24 h])(+2.08/NS/NS/NS[27 h])				I. Peter & J. Yun
	Bra MASO		NS/-3.05/-2.41/-1.82	(NS/-1.68/NS/NS[24 h])(-1.77/-1.48/NS/-2.07[27 h])				I. Peter & J. Yun
	Myc MASO		NS/NS/NS/NS	(NS/NS/NS/NS[24 h])(-1.63/NS/NS/NS[27 h])				I. Peter & J. Yun
	Otxa MASO		NS/NS/+2.05	(NS/NS/NS[24 h])(NS/NS/NS[27 h])				I. Peter
pks	GataE MASO		-2.2/-3.2/-1.9	-3.4,-1.6,NS/-3.2,-3.6				P. Y. Lee
	Bra MASO¹			-2.6				J. Rast
	DnN MOE⁷	-1.8	-3.3,-2.5/-2.7,-3.1					C. Calestani
	Elk-En⁷			-7.1,-5.2,-6.5				I. Arone
	Gcm MASO		-6.1/-7.2	-5.2/-3.3/-12.3/-7.8				A. Ransick
	N MASO		-2.6		-3.4 (29 h)	-3.1		C. Calestani
	DnN MOE				-2.1 (29 h)			C. Calestani
	Krl MASO		NS/NS	-2.1,-1.7				L. Chen
	FoxA MASO			+3.7		NS/NS		P. Oliveri
	Hex MASO⁴⁹		-3.63/-2.14	NS/-4.69				Q. Tu, P. Oliveri & J. Yun
	FoxN2/3 MASO		NS/-2.54/NS	NS/NS/NS				Q. Tu, P. Oliveri & J. Yun
	SoxC MASO		-2.61/NS	NS/NS				Q. Tu, P. Oliveri & J. Yun
	Tgif MASO		NS/NS/NS/NS	NS/NS/-1.81/NS				Q. Tu, P. Oliveri & J. Yun
	Erg MASO⁴⁹		-4.86/NS/-7.53/-2.85/-2.29	NS/-2.61/-2.18/NS/NS				Q. Tu, P. Oliveri & J. Yun
pm27/sm27	Dri MASO	-3.2/-5.0	-4.0/-4.3/-2.3/-2.8					G. Amore
	Dri-En		-3.2/-2.3					G. Amore
	Pmar1 MOE	NS		+4.0				P. Oliveri
	Pmar1-En	NS		+2.7				P. Oliveri
	Gsc MASO³⁸		-2.2/-3.3	-2.0/-3.0				G. Amore
	Hnf6 MASO		-5.8/-4.0/-3.5/-5.1/-5.3/-2.6/-4.0			NS		G. Amore & O. Otim
	Soxb1 MOE²⁶			-7.8,-13.2/-2.5				L. Chen
	Ets1 MASO			-4.4/NS/-3.21,-5.18/-6.55				P. Oliveri & L. Vega
	Alx1 MOE			NS,-3.56/NS				P. Oliveri
	Ets1 MASO + Alx1 MOE⁴⁷			-4.22,-6.18/-3.33				P. Oliveri
	Hex MASO		-2.52/NS/-2.44	NS/NS/-4.78				Q. Tu, P. Oliveri & J. Yun
	Tel MASO		-2.82/-3.51/NS	NS/NS/NS				Q. Tu, P. Oliveri & J. Yun
	Ets1 MASO		-2.53/-3.27/-3.13/-4.36	-3.48/-4.74/-7.7/-4.72				Q. Tu, P. Oliveri & J. Yun
	Alx1 MASO		-4.02/-1.98/-1.93	-1.97/-1.6/-4.22				Q. Tu, P. Oliveri & J. Yun
	Tgif MASO		-2.03/-2.37/NS/NS	-2.53/-1.91/-2.58/-2.24				Q. Tu, P. Oliveri & J. Yun
	Dri MASO		-1.66/NS	-2.32/-2.09/NS				Q. Tu, P. Oliveri & J. Yun
	Erg MASO		-3.49/-4.64/-8.2/-3.98/-4.08	-2.02/-4.53/-3.88/-2.54/NS				Q. Tu, P. Oliveri & J. Yun
pmar1	Cad MOE	-4.0 (6 h)/-3.0 (6 h)						A. Ransick & T. Minokawa
pmar1	Otx-En	-3.1,-2.9/-2.8						A. Ransick & T. Minokawa
six1/2	Gcm MASO			-2.07/-1.68/-2.23				S. Materna
sm30	Dri MASO		-6.2/-5.4/-5.6/-5.6		-7.5/-5.0/-6.0			G. Amore
	Dri-En				-6.2/-5.4/-5.6/-5.6			G. Amore
	Tbr MASO			-1.8				P. Oliveri & L. Vega
	Alx1 MASO			-2.5				P. Oliveri & L. Vega
	Hnf6 MASO^{35, 40}				-3.2/NS/-2.1/-5.5/-4.1/-3.2/-4.0	-4.5/-6.0/-3.6/-2.7/-4.5		G. Amore & O. Otim
	Ets1 MASO			NS/NS				P. Oliveri
	Alx1 MOE			+2.57/+2.34				P. Oliveri
	Ets1 MASO + Alx1 MOE			NS/NS				P. Oliveri
sm50	Dri MASO²²	NS/-3.0/-2.1/-4.8	NS/-2.5/-4.0/-4.8/-3.2/-2.2/-2.54/-2.61	-2.64/-2.46/NS	-4.0/-3.0/NS/-2.5	+4.0/+3.4		G. Amore, Q. Tu, P. Oliveri & J. Yun
	Dri-En²²		-3.2/-2.3					G. Amore
	Bra MASO¹			-2.2				J. Rast
	Pmar1 MOE¹			+4.4/+2.3				P. Oliveri
	Pmar1-En¹¹			+2.5/NS				P. Oliveri
	Eve MASO			-3.8,-3.5				A. Ransick
	Gsc MASO^{2, 38}		NS,NS,-1.7	-3.2/-2.0	NS/-3.0,-3.0			G. Amore
	Hnf6 MASO		-2.3/-2.5/-2.8/-3.4/-2.5/-2.4/NS		NS/NS	NS		O. Otim & G. Amore
	Krl MASO²⁶	-3.0,NS/-5.3,-4.2	-3.2/NS,-2.4	-4.1,-4.9/-1.7				K. Young & J. Rast
	Ets1 MASO		-1.9/-1.9,-2.01/-2.2/-3.04/NS/NS/-1.92/-4.92	-6.5/-4.6/-3.44,-5.29/-4.25/-4.98/-4.31/-4.16/-6.79/-3.83				P. Oliveri, L. Vega, Q. Tu & J. Yun
	Alx1 MASO		-2.7,NS/NS/-2.88/NS/NS	-3.4/-2.0/NS/-2.09/NS/-4.51				P. Oliveri, L. Vega, Q. Tu & J. Yun
	Eve MASO			-3.5				A. Ransick
	Soxb1 MOE²⁶			-4.5,-9.9/-3.0,-1.8				L. Chen
	Alx1 MOE		NS,NS/NS/NS	NS,-2.04/NS/-2.59				P. Oliveri
	Ets1 MASO + Alx1 MOE⁴⁷		-2.37,-2.49/-2.38/-2.46	-3.98,-5.83/-5.01/-7.38				P. Oliveri
	Hex MASO		-2.07/NS/-2.23	-1.59/NS/-4.43				Q. Tu, P. Oliveri & J. Yun
	Tel MASO		-3.82/-1.96	-2.25/-1.81				Q. Tu, P. Oliveri & J. Yun
	Tgif MASO		NS/NS/NS	-2.03/-3.12/-2.13				Q. Tu, P. Oliveri & J. Yun
	Tbr MASO		NS/NS	NS/-1.79				Q. Tu, P. Oliveri & J. Yun
	Erg MASO		-3.29/-3.89/-2.1/-3.77/-4.0	-2.04/-5.18/-4.34/-2.62/NS				Q. Tu, P. Oliveri & J. Yun
Snail	Pmar1 MOE⁴⁸			+2.99/NS,+2.03				S. Wu & D. McClay
	Alx MASO⁴⁸			-2.54/-3.4,NS				S. Wu & D. McClay
	DN-Ets MOE⁴⁸			NS				S. Wu & D. McClay
	Hex MASO		NS/NS	-2.22/-6.18				Q. Tu, P. Oliveri & J. Yun
	Dri MASO⁴⁹		NS/NS/NS	-2.91/-5.65/-3.21				Q. Tu, P. Oliveri & J. Yun
	Tel MASO		NS/NS/NS	-6.17/NS/NS				Q. Tu, P. Oliveri & J. Yun
	Tbr MASO		NS/NS	NS/-8.57				Q. Tu, P. Oliveri & J. Yun
	Ets1 MASO		NS/NS/NS/NS	NS/-3.06/NS/NS				Q. Tu, P. Oliveri & J. Yun
	Tgif MASO		NS/NS/NS/NS	NS/-2.36/NS/-2.05				Q. Tu, P. Oliveri & J. Yun
	Erg MASO		NS/NS/NS/NS/NS	NS/-3.22/-5.74/NS/+2.19				Q. Tu, P. Oliveri & J. Yun
soxb1	Soxb1 MASO²⁶	NS,NS/NS,NS/NS/+2.5/NS/+3.0,NS/NS,+2.0/NS (6 h)		+3.0,+3.4/+3.6,+3.3	+4.3,+4.3/+3.8,+3.9			C. Livi, J. Rast & K. Young
	Cad MOE			NS				P. Oliveri & K. Young
	Pmar1 MOE			-7.0				P. Oliveri & K. Young
	Pmar1-En			-4.4				P. Oliveri & K. Young
	Pmar1 MOE + Cad MOE			-5.9				P. Oliveri & K. Young
	Pmar1-En + Cad MOE			-4.2				P. Oliveri & K. Young
	Tgif MASO		NS/NS/NS/NS	(NS/NS/NS/NS[24 h])(NS/NS/NS/-1.63[27 h])				I. Peter & J. Yun
	Blimp1b MASO		NS/NS/+3.47/NS/NS	(NS/NS/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h])				I. Peter & J. Yun
	Krl MASO		+1.73/NS/NS/NS	(NS/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h])				I. Peter & J. Yun
soxC	SoxC MASO		+1.8/+1.89/NS/+1.97/NS	(NS/NS/+1.49/+1.53/+1.61[24 h])(+1.7/NS/NS[27 h])				Q. Tu, P. Oliveri, J. Yun & I. Peter
	Ets1 MASO		-1.84/NS/NS/NS	NS/NS/-1.69/NS				Q. Tu, P. Oliveri & J. Yun
	Hex MASO		NS/+1.7/NS	NS/NS/NS				Q. Tu, P. Oliveri & J. Yun
	Blimp1b MASO		NS/NS/NS/NS/NS	(NS/NS/NS/NS/NS[24 h])(NS/-1.93/NS/NS/NS[27 h])				I. Peter & J. Yun
sutx	DnN MOE	NS		-2.7/-2.6/-2.9				C. Calestani
	Gcm MASO		-4.3	-6.7				A. Ransick
	N MASO		-3.1		NS	-4.6		C. Calestani
	Krl MASO		NS/NS	-1.7,NS,-3.2,-2.7				L. Chen
	GataE MASO			-4.2/-1.9/-1.6				P. Y. Lee
tbr	Bra MASO¹¹			-1.8				J. Rast
	Pmar1 MOE	+2.0/NS		+5.9/+3.4				P. Oliveri
	Pmar1-En	+1.7/NS		+4.7/+2.6				P. Oliveri
	Tbr MASO		NS/NS/NS	NS/+1.76/+1.66				Q. Tu, P. Oliveri & J. Yun
tel	Tel MASO		+2.31/+3.78/+2.82	+2.63/+2.25/+2.93				Q. Tu, P. Oliveri & J. Yun
	FoxN2/3 MASO		NS/+2.12/NS	NS/NS/NS				Q. Tu, P. Oliveri & J. Yun
	Ets1 MASO		-1.65/NS/NS/NS	NS/NS/NS/NS				Q. Tu, P. Oliveri & J. Yun
	Hex MASO		NS/+1.89/NS	NS/NS/NS				Q. Tu, P. Oliveri & J. Yun
	Erg MASO		+1.93/NS/+2.06/NS/NS	NS/NS/NS/NS/NS				Q. Tu, P. Oliveri & J. Yun
tgif	Hex MASO		-2.28/-3.53/-2.85	NS/NS/-4.08				Q. Tu, P. Oliveri & J. Yun
	Ets1 MASO		-1.67/-1.82/NS/-2.7	-2.0/-1.59/-2.51/NS				Q. Tu, P. Oliveri & J. Yun
	Tgif MASO		-2.49/-1.93/-1.96/-1.41/NS/NS/-2.06	(-1.86/-3.07/NS/-1.88/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h])				Q. Tu, P. Oliveri, J. Yun & I. Peter
	Tel MASO		NS/-2.39	NS/NS				Q. Tu, P. Oliveri & J. Yun
	Tbr MASO		-2.24/NS/NS	NS/NS/NS				Q. Tu, P. Oliveri & J. Yun
	SoxC MASO		-1.71/NS/NS/NS/NS	(NS/NS/NS/NS/NS[24 h])(NS/NS/NS[27 h])				Q. Tu, P. Oliveri, J. Yun & I. Peter
	Dri MASO		NS/-2.33/NS	NS/-1.76/NS				Q. Tu, P. Oliveri & J. Yun
	Alx1 MASO		-2.33/NS/NS	NS/NS/NS				Q. Tu, P. Oliveri & J. Yun
	Erg MASO		-3.36/-2.87/-2.13/-2.82/-3.08	NS/-3.73/-2.09/-2.21/NS				Q. Tu, P. Oliveri & J. Yun
	GataE MASO		NS/NS/NS/-2.31	(NS/NS/NS/NS[24 h])(-1.74/NS/NS/NS[27 h])				I. Peter & J. Yun
	Bra MASO		-1.53/-3.85/-1.53/-3.21	(-2.04/-3.43/-2.37/-2.31[24 h])(-3.15/-1.64/-1.55/-1.67[27 h])				I. Peter & J. Yun
	Krl MASO		NS/-2.05/-3.43/-4.12	(-1.62/NS/NS/-1.57[24 h])(NS/NS/NS/-1.94[27 h])				I. Peter & J. Yun
	Myc MASO		NS/NS/NS/NS	(-1.75/-2.65/-1.63/NS[24 h])(-1.79/-2.05/NS/-1.56[27 h])				I. Peter & J. Yun
	Dac MASO		-2.05/-1.45/NS/NS	(-2.79/NS/-2.0/NS[24 h])(NS/NS/NS/NS[27 h])				I. Peter & J. Yun
	Blimp1b MASO		-4.58/-1.41/NS/-3.61/-3.0	(-2.62/NS/-2.05/NS/-2.41[24 h])(-2.54/-2.49/NS/-1.81/NS[27 h])				I. Peter & J. Yun
	Hox11/13b MASO		NS/NS/NS	(-2.07/NS/-1.68[24 h])(-2.06/NS/-1.92[27 h])				I. Peter
	Eve MASO	NS/NS	NS/NS/NS	(NS/NS/NS[24 h])(-1.88/-2.02/NS[27 h])				I. Peter
	OtxHD MASO		-1.67/NS/NS	(NS/NS/NS[24 h])(NS/NS/NS[27 h])				I. Peter
ui (via endo16)	Cad MOE⁹	-2.9	-6.2	-5.2				A. Ransick & T. Minokawa
ui (via endo16)	GataE MASO	-2.8,-3.5/-2.7,-1.8						P. Y. Lee
unc4.1	Tgif MASO⁵⁰		NS/NS/NS/NS	(NS/-1.86/-1.87/-1.47[24 h])(NS/NS/NS/-2.25[27 h])				I. Peter & J. Yun
	GataE MASO		NS/NS/NS/NS	(NS/NS/-3.67/-2.47[24 h])(-3.04/NS/-4.41/NS[27 h])				I. Peter & J. Yun
	Blimp1b MASO		NS/NS/NS/NS/NS	(NS/-1.41/NS/-2.16/-2.05[24 h])(-3.28/NS/NS/NS[27 h])				I. Peter & J. Yun
	Krl MASO		NS/NS/NS/NS	(NS/NS/NS/NS[24 h])(NS/-1.46/NS/-2.77[27 h])				I. Peter & J. Yun
	Dac MASO⁵⁰		NS/NS/NS/NS	(-3.72/-1.83/-3.36/-2.46[24 h])(NS/-1.53/-1.47/-1.94[27 h])				I. Peter & J. Yun
	N MASO		NS/NS/NS	(+2.68/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h])				I. Peter & J. Yun
	Bra MASO		NS/NS/NS/NS	(-2.09/-2.96/-2.79/NS[24 h])(NS/-4.95/-1.49/-1.68[27 h])				I. Peter & J. Yun
	Myc MASO		NS/NS/NS/NS	(-1.58/-2.32/-1.83/NS[24 h])(NS/-2.07/NS/NS[27 h])				I. Peter & J. Yun
	Hox11/13b MASO		NS/NS/-2.33	(NS/NS/-4.06[24 h])(NS/NS/-1.82[27 h])				I. Peter
	Eve MASO	NS/NS	NS/NS/NS	(-1.93/-2.66/-3.91[24 h])(-2.73/-2.47/-2.53[27 h])				I. Peter
vegfrII	Hex MASO		NS/NS	NS/-4.03				Q. Tu, P. Oliveri & J. Yun
	Ets1 MASO		NS/NS/NS/NS	-3.66/-2.49/-3.8/-2.4				Q. Tu, P. Oliveri & J. Yun
	Dri MASO		NS/NS/NS	-1.62/-2.2/NS				Q. Tu, P. Oliveri & J. Yun
	Alx1 MASO		-2.56	-2.48	NS			P. Oliveri & Q. Tu
	Alx1 MASO		NS/NS	NS/-2.87				Q. Tu, P. Oliveri & J. Yun
	FoxN2/3 MASO		NS/NS/NS	NS/-1.84/NS				Q. Tu, P. Oliveri & J. Yun
	Tgif MASO		NS/NS/NS/NS	NS/NS/NS/-2.51				Q. Tu, P. Oliveri & J. Yun
	Erg MASO		NS/NS/NS/NS/NS	NS/-2.89/-2.48/NS/NS				Q. Tu, P. Oliveri & J. Yun
wnt8	Blimp1b MASO	NS/NS	-1.6/NS	(NS[24 h])(NS[27 h])NS				C. Livi, I. Peter & J. Yun
	Blimp1b-En	-4.2 (6 h),-2.0/-3.7	-3.2	NS				C. Livi
	Cad MOE	-4.5 (6 h)/-5.4/-5.3/-11.5	-3.9/-2.8	-5.3/-5.0/-4.9				A. Ransick, P. Oliveri & L. Vega
	Otx-En	NS/NS	+2.6/+7.7/+2.1	NS/NS/NS				A. Ransick & T. Minokawa
	GataE MASO¹⁵		NS/+2.3/NS/NS/NS	(NS/NS[24 h])(NS/NS[27 h])NS,NS/NS,NS/NS,NS				P. Y. Lee, I. Peter & J. Yun
	Soxb1 MOE²⁶	-2.3,-2.8	-2.3,-2.6	NS,-2.3/NS				L. Chen
	Pmar1 MOE	+2.3		-4.1				P. Oliveri & L. Vega
	Pmar1-En			-2.6				P. Oliveri & L. Vega
	Bra MASO		-2.01/NS/+1.76/NS	(NS/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h])				I. Peter & J. Yun
	Otxa MASO		NS/+1.71/NS	(NS/NS/NS[24 h])(NS/NS/NS[27 h])				I. Peter
	Eve MASO	NS/NS	NS/NS/NS	(NS/NS/-1.66[24 h])(NS/-2.36/NS[27 h])				I. Peter
z166	Gcm MASO			-2.01/-1.75/-2.07/-1.58				S. Materna
z188	GataE MASO		NS/NS/NS/NS	(NS/NS/NS/NS[24 h])(NS/-1.68/NS/NS[27 h])				I. Peter & J. Yun
	Blimp1b MASO		-1.83/NS/NS/NS/NS	(-2.22/NS/NS/NS/NS[24 h])(NS/-2.09/-1.49/-2.09/NS[27 h])				I. Peter & J. Yun
	N MASO		NS/NS/NS	(NS/NS/NS/+1.68[24 h])(NS/NS/NS/NS[27 h])				I. Peter & J. Yun
	Eve MASO	NS/NS	NS/NS/NS	(NS/NS/-1.77[24 h])(-1.71/NS/NS[27 h])				I. Peter
z48	Tgif MASO		NS/NS/NS/NS	NS/+1.71/NS/NS				Q. Tu, P. Oliveri & J. Yun

Note: Smaller effects are shown as "NS", except where individual NS data are included together with other significant measurements to display scatter or inconsistencies amongst different batches of cDNA. Commas separate replicate measurements in the same cDNA batch; slashes indicate different batches of cDNA from independent experiments, dashes indicate a missing data point

Perturbation

Perturbation:	Genes not affected or shown to be affected only indirectly (8 to 30h, unless otherwise noted)
BMP2/4 MASO⁷	[atbf1, bra, chordin, dri, e2f3, foxa, foxj1, foxk, gsc, hes, hesc, hlf, hmx, hnf6, lefty, lim1, mitf, nfe2, nodal, otxb1/2, shr2, soxb1, soxc, tead4, vegf3 (18-24 h)], [arnt, ets4, hmg2, myb, myc, pax2/5/8, pea3, runt, six3, z173, z188, z199, z487, z55, z60, z85, z86, z92 (24 h)]
Bra MASO⁴	[bmp2/4, bra, chordin, foxa, foxj1, foxk, fxr/ecr, hes, hesc, hlf, hmx, hnf6, lefty, lim1, nfe2, nk2.2, nodal, otxb1/2, shr2, sip1, soxb1, soxc, tbx2/3, tead4, vegf3 (24-30 h)]
Chordin MASO⁷	[atbf1, bmp2/4, chordin, dri, e2f3, foxa, foxj1, foxk, hes, hesc, hlf, hmx, hnf6, lefty, lim1, mitf, nfe2, nk2.2, nodal, otxb1/2, shr2, sip1, soxb1, soxc, tead4, vegf3 (18-24 h)], [arnt, ets4, hmg2, hox7, msx, myb, myc, pax2/5/8, pea3, runt, six3, z173, z188, z199, z487, z55, z60, z85, z86, z92 (24 h)]
Dlx MASO⁷	[atbf1, bmp2/4, bra, chordin, dri, e2f3, foxj1, foxk, fxr/ecr, hes, hesc, hnf6, lefty, lim1, mitf, nfe2, nk2.2, nodal, shr2, soxb1, soxc, tead4, vegf3 (18-24 h)], [hox7, msx (24 h)]
Dri MASO⁵	bra (24-32 h), gcm (28-48 h), [bmp2/4, foxk, fxr/ecr, hesc, hlf, shr2, sip1, tead4 (24-30 h)], [decorin, fvmo, pks (30-48 h)], [e(s), elk, eve, foxb, gatac, gatae, hox11/13b, lim1, not, notch, nrl, otx, su(h), wnt8 (28-32 h)]
Ecr MASO⁷	[atbf1, bmp2/4, bra, chordin, dlx, dri, e2f3, foxa, foxg, foxj1, foxk, fxr/ecr, gsc, hes, hesc, hlf, hmx, hnf6, irxa, lefty, lhx2.9, lim1, mitf, nfe2, nk1, nk2.2, nodal, otxb1/2, shr2, sip1, soxb1, soxc, tbx2/3, tead4, vegf3 (18-24 h)], [arnt, ets4, hmg2, hox7, msx, myb, myc, pax2/5/8, pea3, runt, six3, z173, z188, z199, z487, z55, z60, z85, z86, z92 (24 h)]
FoxA MASO⁴	[atbf1, bmp2/4, bra, chordin, dlx, e2f3, foxa, foxg, foxj1, foxk, fxr/ecr, gsc, hes, hesc, hlf, hmx, hnf6, irxa, lefty, lhx2.9, lim1, nfe2, nk1, nk2.2, nodal, otxb1/2, shr2, sip1, soxb1, soxc, tbx2/3, tead4, vegf3 (24-30 h)]
FoxG MASO⁷	[bmp2/4, bra, foxj1, foxk, hes, hesc, hlf, lim1, nfe2, nodal, otxb1/2, shr2, soxb1, tead4 (18-24 h)], [arnt, hmg2, myb, myc, pax2/5/8, runt, sip1, z173, z188, z199, z60, z85, z92 (24 h)]
FoxJ1 MASO⁴	[atbf1, bmp2/4, bra, chordin, dri, e2f3, foxa, foxk, fxr/ecr, hes, hesc, hlf, hmx, hnf6, lefty, lhx2.9, lim1, mitf, nfe2, nodal, otxb1/2, shr2, sip1, soxb1, soxc, tead4, vegf3 (18-24 h)]
FoxK MASO⁴	[bra, dri, e2f3, foxj1, foxk, hesc, hnf6, nfe2, shr2, soxc, tead4, vegf3 (18-24 h)]
Gsc MASO⁷	[chordin, foxk, hesc, lefty, nfe2, nodal, shr2, soxb1, tead4 (18-24 h)], [coup-tf1, hmg2, myb, pax2/5/8, z173, z188, z487, z60, z85, z92 (24 h)]
HesC MASO⁴	[e2f3, foxk, hes, nfe2, shr2, sip1, soxc (18-24 h)]
Hlf MASO⁸	[arnt, ets4, hmg2, lefty, myb, nk2.2, nodal, tbx2/3, z173, z487, z60, z85, z92 (24 h)]
Hmx MASO⁷	[atbf1, bmp2/4, bra, chordin, dlx, e2f3, foxa, foxg, foxj1, foxk, fxr/ecr, gsc, hes, hesc, hlf, hnf6, irxa, lefty, lhx2.9, lim1, mitf, nfe2, nk1, nk2.2, nodal, otxb1/2, shr2, sip1, soxb1, soxc, tbx2/3, tead4, vegf3 (18-24 h)], [arnt, ets4, hmg2, hox7, msx, myb, myc, pax2/5/8, pea3, runt, six3, z173, z188, z199, z487, z55, z60, z85, z86, z92 (24 h)]
Hnf6 MASO^2,9	[foxj1, foxk, hes, hesc, lim1, nfe2, otxb1/2, shr2, soxb1, soxc, tead4 (24-30 h)], [arnt, ets4, hmg2, myb, myc, pax2/5/8, pea3, runt, six3, z173, z188, z199, z487, z60, z92 (24 h)], [eve, foxb, gatac, gcm, lim1, msp130, otx1/2, sm50, spec1 (30, 48 h)]
Hox7 MASO⁸	[hes, hesc, hnf6, mitf, myb, myc, nfe2, shr2, sip1, soxc, vegf3, z173, z188, z199, z487, z60, z92 (24 h)]
IrxA MASO⁷	[dri, hes, nfe2, shr2, soxb1, tead4 (18-24 h)], [arnt, ets4, myb, myc, pax2/5/8, runt, sip1, z173, z487, z60, z92 (24 h)]
Lefty MASO⁷	[atbf1, bra, dri, e2f3, foxa, foxj1, foxk, hes, hesc, hlf, hnf6, lim1, nfe2, otxb1/2, shr2, sip1, soxb1, soxc, tead4, vegf3 (18-24 h)], [arnt, ets4, hmg2, hox7, myb, myc, pax2/5/8, pea3, runt, six3, z173, z188, z199, z487, z55, z60, z85, z86, z92 (24 h)]
Lhx2.9 MASO⁴	[atbf1, bmp2/4, bra, chordin, dlx, e2f3, foxj1, foxk, fxr/ecr, hesc, hmx, hnf6, lefty, lim1, mitf, nfe2, nk2.2, nodal, otxb1/2, shr2, sip1, soxb1, soxc, tbx2/3, tead4, vegf3 (24-30 h)]
Lim1 MASO⁷	[atbf1, bra, chordin, dri, e2f3, foxa, foxj1, foxk, fxr/ecr, hesc, hlf, hmx, hnf6, lefty, mitf, nfe2, nk2.2, nodal, otxb1/2, shr2, sip1, soxb1, soxc, tead4 (18-24 h)], [arnt, ets4, hmg2, hox7, msx, myb, myc, pax2/5/8, pea3, runt, six3, z173, z188, z199, z487, z55, z60, z85, z86, z92 (24 h)]
NK1 MASO⁷	[bmp2/4, bra, dri, foxj1, foxk, fxr/ecr, hesc, hlf, hnf6, lim1, nfe2, nodal, otxb1/2, shr2, soxb1, soxc, tead4 (24-30 h)], [arnt, ets4, foxa, hmg2, myb, myc, pax2/5/8, pea3, runt, z173, z199, z487, z60, z86, z92 (24 h)]
NK2.2 MASO⁷	[atbf1, bmp2/4, bra, chordin, dlx, dri, e2f3, foxa, foxg, foxj1, foxk, gsc, hes, hesc, hlf, hmx, hnf6, lefty, lhx2.9, lim1, mitf, nfe2, nodal, otxb1/2, shr2, sip1, soxb1, soxc, tbx2/3, tead4, vegf3 (18-24 h)], [hox7, msx (24 h)]
Nodal MASO⁶	atbf1, e2f3, ecr (12-30 h), foxj1, foxk, foxl1, hes, hlf, hnf6, mitf, nfe2, nk2.1, shr2, smad3, smad4, soxC, tead4, zfhox1, [bra, foxa, fxr/ecr, hesc, hmx, sip1, soxb1 (18-24 h)]
Nodal MOE¹	atbf1, dri, e2f3, ecr, foxk, foxl1, gsc, hes, hlf, hnf6, lhx2.9, mitf, nfe2, nk2.1, shr2, smad3, smad4, soxC, tead4, zfhox1
Otxb MASO⁷	[atbf1, bmp2/4, bra, chordin, dlx, e2f3, foxa, foxj1, foxk, fxr/ecr, hesc, hmx, hnf6, lefty, lhx2.9, lim1, nfe2, nk2.2, nodal, otxb1/2, shr2, sip1, soxb1, soxc, tbx2/3, tead4, vegf3 (24-30 h)], [arnt, ets4, hmg2, hox7, msx, myb, myc, pax2/5/8, pea3, runt, six3, z173, z188, z199, z487, z55, z60, z85, z86, z92 (24 h)]
Sip1 MASO⁷	[bmp2/4, dri, e2f3, foxj1, foxk, fxr/ecr, hesc, hlf, hmx, hnf6, lim1, nfe2, nodal, shr2, soxb1, soxc, tead4 (18-24 h)], [ets4, hmg2, hox7 (24 h)]
SoxC MASO⁷	foxa (18-24 h), [atbf1, bmp2/4, bra, chordin, dri, e2f3, foxj1, foxk, fxr/ecr, hes, hesc, hlf, hmx, hnf6, lhx2.9, lim1, mitf, nfe2, nodal, otxb1/2, shr2, sip1, soxb1, tead4, vegf3 (18-30 h)], [arnt, ets4, hmg2, hox7, msx, myb, myc, pax2/5/8, pea3, runt, six3, z173, z188, z199, z487, z55, z60, z85, z86, z92 (24 h)]
Tbx2/3 MASO⁷	[dri, hesc, shr2, soxc, tead4 (18-24 h)], [arnt, sip1, z92 (24 h)]

Footnotes

^*Nanostring data: displayed DeltaCt converted from fold change data

¹Data of J. Nam

²MASO against both long and short forms of Hnf6 mRNA included in this table

⁴Data of Y.H. Su

⁵Data of G. Amore, Y.H. Su

⁶Data of J. Nam, Y.H. Su

⁷Data of Y.H. Su, E. Li

⁸Data of E. Li

⁹Data from E. Li and other sources

EctoQPCRandNano

Contents

QPCR and Nanostring Data Relevant to Ectoderm Network

Perturbation Ct:[Ub-C]-[Ub-Exp]

March 01, 2010

Perturbation

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EctoQPCRandNano

QPCR and Nanostring Data Relevant to Ectoderm Network

Perturbation Ct:[Ub-C]-[Ub-Exp]

March 01, 2010

Perturbation

Footnotes

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