ECB-FEAT-23165839: Difference between revisions
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[[Category:Genes]]<small>Page automatically generated by ECB_legacy_importer Wed Jan 18 09:57:12 2023 </small> | [[Category:Genes]]<small>Page automatically generated by ECB_legacy_importer Wed Jan 18 09:57:12 2023 </small> | ||
===SPU_002633 (<i>Strongylocentrotus purpuratus</i> Genome assembly v.3.1)=== | |||
The first 8aa of the original 92aa predicted by the GLEAN model (SPU_002633.1) against the Spur0.5 genome does not seem to be present in Spur3.1 - this resulted in truncation of the model such that the homeodomain was not intact. An 8aa encoding exon used in the NCBI model XM_778259.1 (GNOMON prediction) was added to the 5prime end of the model to restore the predicted homeodomain. The overlapping WHL model does not predict a homeodomain containing peptide. | |||
Revision as of 10:57, 18 January 2023
Page automatically generated by ECB_legacy_importer Wed Jan 18 09:57:12 2023
SPU_002633 (Strongylocentrotus purpuratus Genome assembly v.3.1)
The first 8aa of the original 92aa predicted by the GLEAN model (SPU_002633.1) against the Spur0.5 genome does not seem to be present in Spur3.1 - this resulted in truncation of the model such that the homeodomain was not intact. An 8aa encoding exon used in the NCBI model XM_778259.1 (GNOMON prediction) was added to the 5prime end of the model to restore the predicted homeodomain. The overlapping WHL model does not predict a homeodomain containing peptide.