BAC Table

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BAC Table

Sequences of BACs (as best we know them) can be accessed by clicking on BAC NCBI link.

These BAC clones are available by request. We will also entertain requests to make additional constructs as time permits. For new preparations, you will need to find the BAC by computer or by screening our libraries. In order to prepare a new recombinant BAC we will need the ID of the BAC clone from our libraries, the sequence of the gene it contains and evidence that you know the position of the gene in the BAC. This is a bit complicated to explain here.

To order BACs for non-commercial purpose please email Veronica Hinman or Olga Zueva. Here is a brief guide on BAC library: BAC Library Guide. For further questions reqarding recombinant BACs techonology please inquire of those below.


Olga Zueva
Veronica Hinman
Andy Cameron

BAC Table

Species Gene Name BAC Name Reporter NCBI Link BAC Size WHL ID SPU ID Comment

S.purpuratus

3Acolf/3Apcol

GFP

[1]

125kb

WHL22.438943



S.purpuratus

3Apcol(W01)

GFP

[2]

125kb




S.purpuratus

3Apcol(w88)


[3]


WHL22.589988

SPU_003768

Echinobase length:122kb

S.purpuratus

3'Hex




SPU_021829


S.purpuratus

Acsbg1


[4]


WHL22.59646,WHL22.59649



S.purpuratus

Ada_1


[5]





S.purpuratus

Ada_1


[6]


WHL22.162939.1

SPU_023134


S.purpuratus

Akt

Cherry

[7]





S.purpuratus

Alx1


[8]





S.purpuratus

Alx1

GFP

[9]

133kb




S.purpuratus

Alx1_1

GFP

135kb

WHL22.731056

SPU_025302


S.purpuratus

Ankfy12

GFP

50kb ,100kb

WHL.22.751898

SPU_024172


S.purpuratus

Apobec






S.purpuratus

Arhgap28

GFP

80kb,200kb

WHL.22.409669


Echinobase length:155kb

S.purpuratus

Arhgap28


80kb,200kb

WHL22.409669

SPU_027628


S.purpuratus

Astacin1

GFP





S.purpuratus

Astacin1


125kb,160kb

WHL22.642085

SPU_019655


S.purpuratus

Astacin5

GFP

125kb,160kb

WHL.22.642085.0



S.purpuratus

Astacin5


125kb,160kb

WHL22.237823

SPU_002178


S.purpuratus

Atbf1


156kb




S.purpuratus

B4galt6_8



WHL22.385964

SPU_007019


S.purpuratus

Betacatenin






S.purpuratus

Blimp1






S.purpuratus

Bmp2/4






S.purpuratus

Brachyury

GFP,RFP,Dendra

131kb




S.purpuratus

Brn 124

GFP

207kb




S.purpuratus

Brn 124






S.purpuratus

Brn 124






S.purpuratus

C14orf124



WHL22.38

SPU_027030


S.purpuratus

C3bf






S.purpuratus

C4mso

GFP

110kb

WHL.22.317555.0.,WHL.22.317555 .1

SPU_018974

Echinobase length:33kb

S.purpuratus

C6orf70L






S.purpuratus

C6orf70L



WHL22.440137

SPU_020361


S.purpuratus

Cah10L






S.purpuratus

Cah10L



WHL22.642603

SPU_004135


S.purpuratus

Cah10L



WHL22.642603

SPU_004136


S.purpuratus

Capk






S.purpuratus

CcLta1

GFP

150000

WHL22.764666

SPU_011692


S.purpuratus

Cdx

Cherry, GFP





S.purpuratus

Clect_14

GFP





S.purpuratus

Clect_14



WHL22.39473

SPU_005991


S.purpuratus

ClvhH1

GFP

11kb

WHL22.674821

SPU_024567


S.purpuratus

Col4a2

GFP


WHL22.77073

SPU_015708


S.purpuratus

Cpa2L_3

GFP


WHL22.153705

SPU_014935


S.purpuratus

Csrnp2

GFP

155kb

WHL22.749825.0 /1

SPU_025496


S.purpuratus

Cyclophillin






S.purpuratus

Cycpln

(No GFP)


WHL22.733408



S.purpuratus

Dach

GFP

246kb




S.purpuratus

Dachouslik




SPU_008299


S.purpuratus

Deaf1L



WHL22.158312

SPU_022541


S.purpuratus

Decorin






S.purpuratus

Delta

Cherry,GFP

126kb




S.purpuratus

Derp13

GFP

120kb

WHL22.505560

SPU_007210


S.purpuratus

Dlx

GFP





S.purpuratus

Dlx

GFP





S.purpuratus

Dopt






S.purpuratus

Dr

GFP


WHL22.544154



S.purpuratus

Dr



WHL22.544154

SPU_017106


S.purpuratus

Dri

GFP

135kb




S.purpuratus

Dri

GFP

142kb




S.purpuratus

E2f3


17kb




S.purpuratus

E2f3






S.purpuratus

Ecr (fxr)






S.purpuratus

Elk

GFP

182kb




S.purpuratus

Elk

GFP





S.purpuratus

Endo16

GFP

55kb




S.purpuratus

Ephrin






S.purpuratus

Erg

GFP

151kb




S.purpuratus

Erg



WHL22.552472

SPU_018483


S.purpuratus

Erg




SPU_009100


S.purpuratus

Ese

GFP





S.purpuratus

Ese

GFP

163kb




S.purpuratus

Ets1

GFP

110kb




S.purpuratus

Ets1

GFP

120kb




S.purpuratus

Eve

GFP,Cherry,H2B Cerulean

158kb




S.purpuratus

Fbn3_2



WHL22.145770

SPU_014065


S.purpuratus

Fbox






S.purpuratus

FcgbpL

GFP

145kb

WHL22.23776

SPU_000439


S.purpuratus

Fmo2






S.purpuratus

Fmo3






S.purpuratus

Foxa

GFP,RFP, Dendra, Cerulean

150kb




S.purpuratus

Foxb

GFP

135kb

WHL.22.743430



S.purpuratus

Foxb


135kb

WHL22.743430

SPU_004551


S.purpuratus

Foxc





Echinobase length:136kb

S.purpuratus

Foxc


237000




S.purpuratus

FoxD

Cherry



SPU_014418.1


S.purpuratus

FoxF






S.purpuratus

Foxg

GFP

200kb




S.purpuratus

Foxg






S.purpuratus

Fox n2/3






S.purpuratus

Foxn2/3

GFP

143kb




S.purpuratus

Foxn2/3

GFP

143kb




S.purpuratus

Foxp






S.purpuratus

Foxq2


72kb




S.purpuratus

Foxy(cy)

GFP

118kb




S.purpuratus

Fray



WHL22.249962,WHL22.249953



S.purpuratus

FreD


121kb

WHL22.427938



S.purpuratus

Frzd






S.purpuratus

Gatac

GFP





S.purpuratus

Gata e






S.purpuratus

Gatae

GFP

100kb




S.purpuratus

Gatae






S.purpuratus

Gcm






S.purpuratus

Gcn2



WHL22.244656

SPU_025674


S.purpuratus

Gelsolinlike






S.purpuratus

Gelsolin putative




SPU_000296


S.purpuratus

Gsc

GFP,H2B Cerulean

201kb




S.purpuratus

Hairy 2/4(Hes)






S.purpuratus

Hao1_4

(no GFP)


WHL22.329268



S.purpuratus

Hbn






S.purpuratus

Hedgehog

GFP

178kb




S.purpuratus

Hes




SPU_012918


S.purpuratus

Hesblik




SPU_026488


S.purpuratus

Hesc






S.purpuratus

Hesc

GFP

217kb

WHL22.235339



S.purpuratus

Hex

GFP

145kb




S.purpuratus

Hex




SPU_017990


S.purpuratus

Hexb

GFP


WHL22.364740

SPU_017990


S.purpuratus

Hgcn5






S.purpuratus

Hhex

GFP


22.626418



S.purpuratus

Hhex

GFP,Cherry


22.626418



S.purpuratus

Hibch



22.119352



S.purpuratus

Hmx


121kb




S.purpuratus

Hmx

GFP, cherry

144kb




S.purpuratus

Hnf1

GFP

168kb




S.purpuratus

Hnf1like






S.purpuratus

Hnf1like






S.purpuratus

Hnf4






S.purpuratus

Hnf4






S.purpuratus

Hnf6

GFP, Cherry

253kb




S.purpuratus

Hnf6






S.purpuratus

Hnf6






S.purpuratus

Hox1113a_b

GFP





S.purpuratus

Hox 11/13b

GFP

160kb




S.purpuratus

Hox 11/13b

GFP

145kb




S.purpuratus

Hox 11/13b

GFP

160kb




S.purpuratus

Hox 11/13b

GFP

105kb




S.purpuratus

Hox 11/13b

GFP,H2B Cerulean

192kb




S.purpuratus

Hox 11/13b

GFP

180kb




S.purpuratus

Hox 11/13b

GFP, Cherry

142kb




S.purpuratus

Hox7

GFP

236kb




S.purpuratus

Hps4L



WHL22.562382.0

SPU_025757


S.purpuratus

Hypp_2177



WHL22.643455

SPU_027439


S.purpuratus

Hypp_2998, Hypp_2999

GFP

145kb

WHL.22.239379

SPU_018406


S.purpuratus

Hypp_2998, Hypp_2999


145kb

WHL22.239379

SPU_018407

Echinobase length: 203kb

S.purpuratus

Hypp_375



WHL22.69123

SPU_024491


S.purpuratus

Ia1






S.purpuratus

Ia1

cherry





S.purpuratus

Id




SPU_021469


S.purpuratus

Id




SPU_000791


S.purpuratus

Ig/Egf/Vwc



WHL22.139301

SPU_017202


S.purpuratus

Inturned

GFP


WHL22.391869

SPU_008070


S.purpuratus

Ipgm



WHL22.633329,WHL22.633332

SPU_010377


S.purpuratus

Ire1,Ern2L

GFP


WHL22.270316.1

SPU_017184


S.purpuratus

Irxa


206kb




S.purpuratus

Kakapo






S.purpuratus

Krox

GFP

7093kb




S.purpuratus

Lefty

GFP, Cherry





S.purpuratus

Lhx2.9

GFP, Cherry

124kb




S.purpuratus

Lim

GFP, Cherry

138kb




S.purpuratus

Limk



22.431075.2

SPU_022207


S.purpuratus

Lmo4






S.purpuratus

Lmo4






S.purpuratus

Lmo4






S.purpuratus

Lmpx






S.purpuratus

Lmr

GFP


22.327381.0

SPU_006026


S.purpuratus

Lox

cherry





S.purpuratus

MitF

GFP

152kb

WHL.22.677144

SPU_008175

note

S.purpuratus

Mrpl12lik




SPU_024214

Echinobase length: 99kb

S.purpuratus

Mrpl2




SPU_009141


S.purpuratus

Msp130



WHL22.438943

SPU_002088


S.purpuratus

Msp130

GFP

135kb

WHL22.438943

SPU_002088


S.purpuratus

Msp130_1






S.purpuratus

Msp130_1






S.purpuratus

Msp130r1



WHL22.438976

SPU_013822


S.purpuratus

Msp130r3



WHL22.438997

SPU_013823


S.purpuratus

Msp130related




SPU_014496


S.purpuratus

Msp130related




SPU_013822


S.purpuratus

Msp130related




SPU_015763


S.purpuratus

Msp130related




SPU_014492


S.purpuratus

Msx




SPU_020565


S.purpuratus

Mt14/MmpL7



WHL22.312130

SPU_028750


S.purpuratus

Mt14/MmpL7



WHL22.312033

SPU_028748


S.purpuratus

NA



WHL22.148948

SPU_023291


S.purpuratus

Nanos2

GFP

41kb




S.purpuratus

Nk1






S.purpuratus

Nk1

GFP, Cherry

128kb




S.purpuratus

Nk2.2

GFP, Cherry

187kb




S.purpuratus

Nk7

GFP

186kb

WHL22.567485.0

SPU_022573


S.purpuratus

Nk7






S.purpuratus

Nk7

GFP


WHL22.567485

SPU_022573


S.purpuratus

Nkx21






S.purpuratus

Nkx32

cherry





S.purpuratus

Nodal

GFP, RFP

180kb




S.purpuratus

None



WHL22.239320

SPU_018403


S.purpuratus

Not

Cherry

162kb




S.purpuratus

Notch

GFP

171kb




S.purpuratus

Notch




SPU_027006


S.purpuratus

Notch






S.purpuratus

Npff2L4

GFP


WHL.22.523272.0

SPU_025314


S.purpuratus

Nr1




SPU_028255

Echinobase length: 75kb

S.purpuratus

Nrl






S.purpuratus

Orct






S.purpuratus

Osr

GFP

142kb




S.purpuratus

Otx

GFP

161kb




S.purpuratus

Otx


162kb




S.purpuratus

P16

GFP

120kb

WHL.22.239481

SPU_018408


S.purpuratus

P16



WHL22.239481

SPU_018408

Echinobase length: 148kb

S.purpuratus

P58_a

GFP

145kb

WHL.22.23776

SPU_00439

Echinobase length: 167kb.Same clone and WHL as FcgbpL

S.purpuratus

P58_a


145kb

WHL22.23776

SPU_004159


S.purpuratus

Pak(p21)ph

GFP


WHL.22.294876

SPU_003534


S.purpuratus

Pax2/5/8





Echinobase length: 83kb

S.purpuratus

Pax2/5/8






S.purpuratus

Pbx






S.purpuratus

Pdgfr/vegfrL



WHL22.240520

SPU_000310


S.purpuratus

Pdgfr/vegfrlik




SPU_021021


S.purpuratus

Pks

GFP

144kb




S.purpuratus

Pks






S.purpuratus

PKS




SPU_028395


S.purpuratus

PKS




SPU_028395


S.purpuratus

Plxdc2, Plxdc2_1



WHL22.605782



S.purpuratus

Pm27






S.purpuratus

Pm27






S.purpuratus

Pmar1




SPU_015828


S.purpuratus

Pmar1




SPU_015829


S.purpuratus

Pmar1




SPU_014721


S.purpuratus

Polyabinding






S.purpuratus

Protocad15L

GFP

120kb

WHL22.138023

SPU_003730


S.purpuratus

Prox

GFP,H2B

186kb




S.purpuratus

Ptpriz

GFP

120kb

WHL.22.416979.0



S.purpuratus

Ptpriz

GFP


WHL.22.416979.0

SPU_023115


S.purpuratus

RigiL8






S.purpuratus

Rx






S.purpuratus

Samd9L_2



WHL22.254949

SPU_005515

Echinobase length: 159kb

S.purpuratus

Sc1

GFP

122kb




S.purpuratus

Sc1

GFP




Echinobase length: 159kb

S.purpuratus

Sc1

GFP

267kb




S.purpuratus

Sc1

GFP





S.purpuratus

SerpL11



WHL22.332375

SPU_004543


S.purpuratus

Shr2


111




S.purpuratus

Sip1






S.purpuratus

Six1/2

GFP

168kb




S.purpuratus

Six1/2

GFP

168kb




S.purpuratus

Six 3






S.purpuratus

Six 3

Cherry

92kb




S.purpuratus

Six 3

cherry

92kb




S.purpuratus

Slc2a5

GFP

95kb

WHL22.692383

SPU_027868


S.purpuratus

Sm29

GFP

60kb

WHL22.39470

SPU_005990


S.purpuratus

Sm30




SPU_000826


S.purpuratus

Sm30




SPU_004869


S.purpuratus

Sm30c

GFP

34kb



Echinobase length: 80kb

S.purpuratus

Sm30c



WHL22.518121

SPU_000827


S.purpuratus

Sm30E

GFP

100kb

WHL22.70610

SPU_004867


S.purpuratus

Sm37



WHL22.742403



S.purpuratus

Sm50

GFP

144kb




S.purpuratus

Soxb2






S.purpuratus

Soxc

GFP, Cherry

159kb




S.purpuratus

Soxe

GFP

110kb




S.purpuratus

SpClectin



WHL22.728834

SPU_007882


S.purpuratus

SpClectin



WHL22.728834

SPU_007882


S.purpuratus

Spnsh1

GFP


WHL22.60674.1

SPU_000847


S.purpuratus

SpPpap2b



WHL22.310985

SPU_011127


S.purpuratus

Srcr185



WHL22.253874

SPU_022285


S.purpuratus

Synb

GFP

130kb




S.purpuratus

Synb

GFP

150kb




S.purpuratus

Tbrain

GFP, Cherry

137kb




S.purpuratus

Tbx 2/3

GFP





S.purpuratus

Tbx6/1




SPU_020345


S.purpuratus

Tead4






S.purpuratus

Tel

GFP





S.purpuratus

TgfbrtII



WHL22.191099.0



S.purpuratus

TgfbrtII



WHL22.191099.0

SPU_017511


S.purpuratus

Tgif

Cherry

190kb




S.purpuratus

Tgif

GFP, Cherry

107kb




S.purpuratus

Tho1



WHL22.614092

SPU_007382


S.purpuratus

Tim1






S.purpuratus

Tk8






S.purpuratus

Tk8



WHL22.147868

SPU_004747


S.purpuratus

Tk8






S.purpuratus

Tk8






S.purpuratus

Tk8






S.purpuratus

Tll

GFP

11kb




S.purpuratus

Tmem68



WHL22.629570

SPU_028851


S.purpuratus

Tob

GFP


WHL.22.145164

SPU_016792

Echinobase length: 110000kb

S.purpuratus

Tollip_1

GFP


WHL22.544727

SPU_026252


S.purpuratus

Trim2_1



WHL22.742590

SPU_020546


S.purpuratus

Trpm3_3 (W06)

GFP

130kb

WHL22.540206

SPU_018142


S.purpuratus

Trpm3_4



WHL22.652421

SPU_011587


S.purpuratus

Ubiquitin

GFP

150kb




S.purpuratus

Unc4.1






S.purpuratus

Unc4.1






S.purpuratus

Unc4.1






S.purpuratus

Unc4.1






S.purpuratus

UnivinBMP2.4






S.purpuratus

UnivinBMP2.4






S.purpuratus

Vasa

GFP

159kb




S.purpuratus

Vegf




SPU_005737


S.purpuratus

Vegf2



WHL22.194484

SPU_005737


S.purpuratus

Vegf3 Erica

GFP





S.purpuratus

Vegf3 Julie

GFP

78kb




S.purpuratus

VegFr



WHL22.240520

SPU_000310


S.purpuratus

Vparpf_3






S.purpuratus

Wnt5

GFP

135kb




S.purpuratus

Wnt8

GFP

78kb




S.purpuratus

Wnt8






S.purpuratus

Z160

GFP


WHL22.6653.0

SPU_018075


S.purpuratus

Z160



WHL22.6653

SPU_018075


S.purpuratus

Z166

GFP

105kb




S.purpuratus

Z167






S.purpuratus

Z188

GFP

217kb




S.purpuratus

Z199 (Sp5)






S.franciscanus

Blimp1






S.franciscanus

Brachyury

GFP

100kb




S.franciscanus

Brachyury

GFP

100kb




S.franciscanus

Brn1/2/4






S.franciscanus

Delta






S.franciscanus

Dlx






S.franciscanus

Endo16






S.franciscanus

Erg






S.franciscanus

Eve






S.franciscanus

FoxA






S.franciscanus

Gatae

GFP





S.franciscanus

Gatae

GFP





S.franciscanus

Gcm






S.franciscanus

Hox11/13b






S.franciscanus

IrxA






S.franciscanus

Nk2.2






S.franciscanus

Otx






S.franciscanus

Tbrain






S.franciscanus

Wnt8






P.lividus

Hbox12






P.lividus

Lim






P.lividus

Nodal

GFP, Cherry





L.variegatus

Alx1

GFP

162kb




L.variegatus

Apobec





Echinobase length:51kb

L.variegatus

Apobec






L.variegatus

Apol






L.variegatus

Betacatenin






L.variegatus

Blimp1






L.variegatus

Blimp1/krox






L.variegatus

Bmp2/4






L.variegatus

Brachyury

GFP

139kb




L.variegatus

Brachyury






L.variegatus

Brn1 2/4






L.variegatus

Brn1 2/4






L.variegatus

Capk






L.variegatus

Capk






L.variegatus

Cyclophillin






L.variegatus

Dac






L.variegatus

Decorin






L.variegatus

Delta






L.variegatus

Delta






L.variegatus

Delta






L.variegatus

Dlx






L.variegatus

Dopt






L.variegatus

Dri





Echinobase length:169kb.80130 smear

L.variegatus

Ecr






L.variegatus

Endo16

GFP

22kb




L.variegatus

Ese






L.variegatus

Ets1

GFP

132kb




L.variegatus

Eve






L.variegatus

Fmo2





Echinobase length:167kb.Same clone and WHL as P58a

L.variegatus

Fmo3






L.variegatus

Foxa






L.variegatus

Foxa

GFP

133kb




L.variegatus

Foxb






L.variegatus

Foxg






L.variegatus

Foxk






L.variegatus

Foxn2/3






L.variegatus

Foxo






L.variegatus

Gatac






L.variegatus

Gatac






L.variegatus

Gatae

GFP

135kb




L.variegatus

Gatae






L.variegatus

Gcm






L.variegatus

Gelsolin






L.variegatus

Gsc






L.variegatus

Hes






L.variegatus

Hmx






L.variegatus

Hnf1






L.variegatus

Hnf6






L.variegatus

Hox1113a






L.variegatus

Hox1113b






L.variegatus

IrxA






L.variegatus

Kakapo






L.variegatus

Kakapo






L.variegatus

Lim1






L.variegatus

Nfe2






L.variegatus

Nfkb






L.variegatus

Nk1






L.variegatus

Nk2.2






L.variegatus

Nodal

GFP





L.variegatus

Not






L.variegatus

Notch






L.variegatus

Notch






L.variegatus

Nrl






L.variegatus

Otx






L.variegatus

Pks






L.variegatus

Pm27






L.variegatus

Pmar1






L.variegatus

Profilin






L.variegatus

Prox






L.variegatus

Sip1






L.variegatus

Six1/2






L.variegatus

Snail (Z88)






L.variegatus

SoxB1






L.variegatus

Soxc






L.variegatus

Tbr






L.variegatus

Tbrain

GFP

551kb




L.variegatus

Tbx2/3






L.variegatus

Tel






L.variegatus

Wnt5






L.variegatus

Wnt8

GFP

127kb




L.variegatus

Wnt8






L.variegatus

Z13






E.tribuloides

Eve


120kb




A.punctulata

Brachyury

GFP

169kb




A.punctulata

Delta

GFP

36kb




A.punctulata

Eve

GFP

120kb




A.punctulata

Foxa






A.punctulata

Foxa

GFP

133kb




A.punctulata

Gatac

GFP

104kb




A.punctulata

Gatae

GFP

145kb




A.punctulata

Gcm

GFP

119kb




A.punctulata

Otx






A.punctulata

Otx

GFP





A.punctulata

Tbrain

GFP





A.punctulata

Wnt8






A.miniata

Brachyury

GFP

90kb




A.miniata

Delta

GFP

150kb




A.miniata

Foxa

GFP

90kb




A.miniata

Gatae

GFP

150kb




A.miniata

Gatae






A.miniata

Gatae






A.miniata

Otx

GFP

169kb




A.miniata

Soxc

GFP





A.miniata

Soxc

GFP





A.miniata

Tbr

GFP