BAC Table
BAC Table
Sequences of BACs (as best we know them) can be accessed by clicking on BAC NCBI link.
These BAC clones are available by request. We will also entertain requests to make additional constructs as time permits. For new preparations, you will need to find the BAC by computer or by screening our libraries. In order to prepare a new recombinant BAC we will need the ID of the BAC clone from our libraries, the sequence of the gene it contains and evidence that you know the position of the gene in the BAC. This is a bit complicated to explain here.
To order BACs for non-commercial purpose please contact Veronica Hinman. Here is a brief BAC Library Guide.
| Species | Gene Name | BAC Name | Reporter | NCBI Link | BAC Size | WHL ID | SPU ID | Comment |
|---|---|---|---|---|---|---|---|---|
|
S.purpuratus |
3Acolf/3Apcol |
Sp_3055B12 |
GFP |
|
125kb |
WHL22.438943 |
|
|
|
S.purpuratus |
3Apcol(W01) |
Sp_3066N3 |
GFP |
|
125kb |
|
|
|
|
S.purpuratus |
3Apcol(w88) |
Sp_R33066N3 |
|
|
|
WHL22.589988 |
SPU_003768 |
Echinobase length:122kb |
|
S.purpuratus |
3'Hex |
Sp_R33044F0 |
|
|
|
SPU_021829 |
| |
|
S.purpuratus |
Acsbg1 |
Sp_1020M3 |
|
|
|
WHL22.59646,WHL22.59649 |
|
|
|
S.purpuratus |
Ada_1 |
Sp_113F15 |
|
|
|
|
|
|
|
S.purpuratus |
Ada_1 |
Sp_R3113F15 |
|
|
|
WHL22.162939.1 |
SPU_023134 |
|
|
S.purpuratus |
Akt |
Sp_3050P16 |
Cherry |
|
|
|
|
|
|
S.purpuratus |
Alx1 |
Sp_143J11 |
|
|
|
|
|
|
|
S.purpuratus |
Alx1 |
Sp_042I08_L|Sp_42I8 |
GFP |
|
133kb |
|
|
|
|
S.purpuratus |
Alx1_1 |
Sp_R33063K17 |
GFP |
|
135kb |
WHL22.731056 |
SPU_025302 |
|
|
S.purpuratus |
Ankfy12 |
Sp_3097C6 |
GFP |
|
50kb ,100kb |
WHL.22.751898 |
SPU_024172 |
|
|
S.purpuratus |
Apobec |
Sp_112F15_S |
|
|
|
|
| |
|
S.purpuratus |
Arhgap28 |
Sp_3080H22 |
GFP |
|
80kb,200kb |
WHL.22.409669 |
|
Echinobase length:155kb |
|
S.purpuratus |
Arhgap28 |
Sp_R33097N6 |
|
|
80kb,200kb |
WHL22.409669 |
SPU_027628 |
|
|
S.purpuratus |
Astacin1 |
Sp_3004P19 |
GFP |
|
|
|
|
|
|
S.purpuratus |
Astacin1 |
Sp_R33088G04 |
|
|
125kb,160kb |
WHL22.642085 |
SPU_019655 |
|
|
S.purpuratus |
Astacin5 |
Sp_17G24 |
GFP |
|
125kb,160kb |
WHL.22.642085.0 |
|
|
|
S.purpuratus |
Astacin5 |
Sp_R34007P18 |
|
|
125kb,160kb |
WHL22.237823 |
SPU_002178 |
|
|
S.purpuratus |
Atbf1 |
Sp_3042J1 |
|
|
156kb |
|
|
|
|
S.purpuratus |
B4galt6_8 |
Sp_R33045N1 |
|
|
|
WHL22.385964 |
SPU_007019 |
|
|
S.purpuratus |
Betacatenin |
Sp_154N12_L |
|
|
|
|
| |
|
S.purpuratus |
Blimp1 |
Sp_163O19_L |
|
|
|
|
| |
|
S.purpuratus |
Bmp2/4 |
Sp_1108H16 |
|
|
|
|
|
|
|
S.purpuratus |
Brachyury |
Sp_117A03_L |
GFP,RFP,Dendra |
131kb |
|
|
| |
|
S.purpuratus |
Brn 124 |
Sp_16C24 |
GFP |
|
207kb |
|
|
|
|
S.purpuratus |
Brn 124 |
Sp_180F15 |
|
|
|
|
|
|
|
S.purpuratus |
Brn 124 |
Sp_95O3 |
|
|
|
|
|
|
|
S.purpuratus |
C14orf124 |
Sp_R33083P17 |
|
|
|
WHL22.38 |
SPU_027030 |
|
|
S.purpuratus |
C3bf |
Sp_076N15_L |
|
|
|
|
|
|
|
S.purpuratus |
C4mso |
Sp_3002L17 |
GFP |
110kb |
WHL.22.317555.0.,WHL.22.317555 .1 |
SPU_018974 |
Echinobase length:33kb | |
|
S.purpuratus |
C6orf70L |
Sp_14B10,Sp_3101E10,Sp_3099N11 |
|
|
|
|
|
|
|
S.purpuratus |
C6orf70L |
Sp_R34013G18 |
|
|
|
WHL22.440137 |
SPU_020361 |
|
|
S.purpuratus |
Cah10L |
Sp_R321I13 |
|
|
|
|
|
|
|
S.purpuratus |
Cah10L |
Sp_R33055A16 |
|
|
|
WHL22.642603 |
SPU_004135 |
|
|
S.purpuratus |
Cah10L |
Sp_R33057B15 |
|
|
|
WHL22.642603 |
SPU_004136 |
|
|
S.purpuratus |
Capk |
Sp_083N11_S |
|
|
|
|
| |
|
S.purpuratus |
CcLta1 |
Sp_R38H4 |
GFP |
|
150000 |
WHL22.764666 |
SPU_011692 |
|
|
S.purpuratus |
Cdx |
Sp_3088G4 |
Cherry, GFP |
|
|
|
|
|
|
S.purpuratus |
Clect_14 |
Sp_3110K19 |
GFP |
|
|
|
|
|
|
S.purpuratus |
Clect_14 |
Sp_R33032K03 |
|
|
|
WHL22.39473 |
SPU_005991 |
|
|
S.purpuratus |
ClvhH1 |
Sp_R33103O23 |
GFP |
|
11kb |
WHL22.674821 |
SPU_024567 |
|
|
S.purpuratus |
Col4a2 |
Sp_R33077D06 |
GFP |
|
|
WHL22.77073 |
SPU_015708 |
|
|
S.purpuratus |
Cpa2L_3 |
Sp_R31040I20 |
GFP |
|
|
WHL22.153705 |
SPU_014935 |
|
|
S.purpuratus |
Csrnp2 |
Sp_43E11 |
GFP |
|
155kb |
WHL22.749825.0 /1 |
SPU_025496 |
|
|
S.purpuratus |
Cyclophillin |
Sp_014A23_L |
|
|
|
|
|
|
|
S.purpuratus |
Cycpln |
1111 B19 |
(No GFP) |
|
|
WHL22.733408 |
|
|
|
S.purpuratus |
Dach |
Sp_12 P15 |
GFP |
|
246kb |
|
|
|
|
S.purpuratus |
Dachouslik |
Sp_R33025P1 |
|
|
|
SPU_008299 |
| |
|
S.purpuratus |
Deaf1L |
Sp_R34B03 |
|
|
|
WHL22.158312 |
SPU_022541 |
|
|
S.purpuratus |
Decorin |
Sp_119C23_L |
|
|
|
|
|
|
|
S.purpuratus |
Delta |
Sp_46A16 |
Cherry,GFP |
126kb |
|
|
| |
|
S.purpuratus |
Derp13 |
Sp_R34010K23 |
GFP |
|
120kb |
WHL22.505560 |
SPU_007210 |
|
|
S.purpuratus |
Dlx |
Sp_26L24 |
GFP |
|
|
|
|
|
|
S.purpuratus |
Dlx |
Sp_47I19 |
GFP |
|
|
|
|
|
|
S.purpuratus |
Dopt |
Sp_188B16_L |
|
|
|
|
| |
|
S.purpuratus |
Dr |
Sp_44J22 |
GFP |
|
WHL22.544154 |
|
| |
|
S.purpuratus |
Dr |
Sp_R316F8 |
|
|
|
WHL22.544154 |
SPU_017106 |
|
|
S.purpuratus |
Dri |
Sp_118J14_L |
GFP |
|
135kb |
|
|
|
|
S.purpuratus |
Dri |
Sp_74F08 |
GFP |
|
142kb |
|
|
|
|
S.purpuratus |
E2f3 |
Sp_3093P10 |
|
|
17kb |
|
|
|
|
S.purpuratus |
E2f3 |
Sp_3100O17 |
|
|
|
|
|
|
|
S.purpuratus |
Ecr (fxr) |
Sp_1018H13 |
|
|
|
|
|
|
|
S.purpuratus |
Elk |
Lv_12B5 |
GFP |
|
182kb |
|
|
|
|
S.purpuratus |
Elk |
Sp_23B5 |
GFP |
|
|
|
|
|
|
S.purpuratus |
Endo16 |
Sp_127I21_S |
GFP |
55kb |
|
|
| |
|
S.purpuratus |
Ephrin |
Sp_024N08_L |
|
|
|
|
|
|
|
S.purpuratus |
Erg |
Sp_14H16 |
GFP |
|
151kb |
|
|
|
|
S.purpuratus |
Erg |
Sp_R33063M23 |
|
|
|
WHL22.552472 |
SPU_018483 |
|
|
S.purpuratus |
Erg |
Sp_R33085K1 |
|
|
|
SPU_009100 |
| |
|
S.purpuratus |
Ese |
Sp_1032O14 |
GFP |
|
|
|
|
|
|
S.purpuratus |
Ese |
Sp_3107I24 |
GFP |
|
163kb |
|
|
|
|
S.purpuratus |
Ets1 |
Sp_28J16 |
GFP |
|
110kb |
|
|
|
|
S.purpuratus |
Ets1 |
Sp_92P5 |
GFP |
|
120kb |
|
|
|
|
S.purpuratus |
Eve |
Sp_79A2 |
GFP,Cherry,H2B Cerulean |
158kb |
|
|
| |
|
S.purpuratus |
Fbn3_2 |
Sp_R33090B11 |
|
|
|
WHL22.145770 |
SPU_014065 |
|
|
S.purpuratus |
Fbox |
Sp_038F09_L |
|
|
|
|
|
|
|
S.purpuratus |
FcgbpL |
Sp_3027D15 |
GFP |
|
145kb |
WHL22.23776 |
SPU_000439 |
|
|
S.purpuratus |
Fmo2 |
Sp_055A17_L |
|
|
|
|
| |
|
S.purpuratus |
Fmo3 |
Sp_072G21_L |
|
|
|
|
| |
|
S.purpuratus |
Foxa |
Sp_41 I19 |
GFP,RFP, Dendra, Cerulean |
|
150kb |
|
|
|
|
S.purpuratus |
Foxb |
Sp_114N15_L |
GFP |
135kb |
WHL.22.743430 |
|
| |
|
S.purpuratus |
Foxb |
Sp_R33087A22 |
|
135kb |
WHL22.743430 |
SPU_004551 |
| |
|
S.purpuratus |
Foxc |
Sp_136D11_L |
|
|
|
|
|
Echinobase length:136kb |
|
S.purpuratus |
Foxc |
Sp_3062K23 |
|
|
237000 |
|
|
|
|
S.purpuratus |
FoxD |
Sp_3053L6 |
Cherry |
|
|
|
SPU_014418.1 |
|
|
S.purpuratus |
FoxF |
Sp_34M18 |
|
|
|
|
|
|
|
S.purpuratus |
Foxg |
Sp_3055A17 |
GFP |
|
200kb |
|
|
|
|
S.purpuratus |
Foxg |
Sp_3101O07 |
|
|
|
|
|
|
|
S.purpuratus |
Fox n2/3 |
Sp_3088J6 |
|
|
|
|
|
|
|
S.purpuratus |
Foxn2/3 |
Sp_307J6 |
GFP |
|
143kb |
|
|
|
|
S.purpuratus |
Foxn2/3 |
Sp_3088J6 |
GFP |
|
143kb |
|
|
|
|
S.purpuratus |
Foxp |
Sp_3052G21 |
|
|
|
|
|
|
|
S.purpuratus |
Foxq2 |
Sp_3044A21 |
|
|
72kb |
|
|
|
|
S.purpuratus |
Foxy(cy) |
Sp_1032H24 |
GFP |
|
118kb |
|
|
|
|
S.purpuratus |
Fray |
Sp_3096N17, Sp_1014L2 |
|
|
|
WHL22.249962,WHL22.249953 |
|
|
|
S.purpuratus |
FreD |
Sp_3027C3 |
|
|
121kb |
WHL22.427938 |
|
|
|
S.purpuratus |
Frzd |
Sp_153L07_S |
|
|
|
|
|
|
|
S.purpuratus |
Gatac |
Sp_081C18_L |
GFP |
|
|
|
|
|
|
S.purpuratus |
Gata e |
Sp_40I9 |
|
|
|
|
|
|
|
S.purpuratus |
Gatae |
Sp_040I09_L |
GFP |
100kb |
|
|
| |
|
S.purpuratus |
Gatae |
Sp_091A10_L |
|
|
|
|
|
|
|
S.purpuratus |
Gcm |
Sp_187M9 |
|
|
|
|
|
|
|
S.purpuratus |
Gcn2 |
Sp_1130J9 |
|
|
|
WHL22.244656 |
SPU_025674 |
|
|
S.purpuratus |
Gelsolinlike |
Sp_118E15_S |
|
|
|
|
| |
|
S.purpuratus |
Gelsolin putative |
Sp_R332B3 |
|
|
|
SPU_000296 |
| |
|
S.purpuratus |
Gsc |
Sp_3051B6 |
GFP,H2B Cerulean |
|
201kb |
|
|
|
|
S.purpuratus |
Hairy 2/4(Hes) |
Sp_103B20 |
|
|
|
|
|
|
|
S.purpuratus |
Hao1_4 |
Sp_12F6 |
(no GFP) |
|
|
WHL22.329268 |
|
|
|
S.purpuratus |
Hbn |
Sp_3067M10 |
|
|
|
|
|
|
|
S.purpuratus |
Hedgehog |
Sp_4011N13 |
GFP |
|
178kb |
|
|
|
|
S.purpuratus |
Hes |
Sp_R346N1 |
|
|
|
SPU_012918 |
| |
|
S.purpuratus |
Hesblik |
Sp_R33095M1 |
|
|
|
SPU_026488 |
| |
|
S.purpuratus |
Hesc |
Sp_3120N1 |
|
|
|
|
|
|
|
S.purpuratus |
Hesc |
Sp_7G5 |
GFP |
|
217kb |
WHL22.235339 |
|
|
|
S.purpuratus |
Hex |
Sp_6P7 |
GFP |
|
145kb |
|
|
|
|
S.purpuratus |
Hex |
Sp_R33050O2 |
|
|
|
SPU_017990 |
| |
|
S.purpuratus |
Hexb |
Sp_3050O24 |
GFP |
|
|
WHL22.364740 |
SPU_017990 |
|
|
S.purpuratus |
Hgcn5 |
Sp_089M06_L |
|
|
|
|
|
|
|
S.purpuratus |
Hhex |
Sp_3032G13 |
GFP |
|
|
22.626418 |
|
|
|
S.purpuratus |
Hhex |
Sp_3080E21 |
GFP,Cherry |
|
|
22.626418 |
|
|
|
S.purpuratus |
Hibch |
Sp_3061L15 |
|
|
|
22.119352 |
|
|
|
S.purpuratus |
Hmx |
Sp_15F1 |
|
|
121kb |
|
|
|
|
S.purpuratus |
Hmx |
Sp_4004C20 |
GFP, cherry |
|
144kb |
|
|
|
|
S.purpuratus |
Hnf1 |
Sp_25L21 |
GFP |
|
168kb |
|
|
|
|
S.purpuratus |
Hnf1like |
Sp_3003N7 |
|
|
|
|
|
|
|
S.purpuratus |
Hnf1like |
Sp_42F2 |
|
|
|
|
|
|
|
S.purpuratus |
Hnf4 |
Sp_3045J21 |
|
|
|
|
|
|
|
S.purpuratus |
Hnf4 |
Sp_3095 J22 |
|
|
|
|
|
|
|
S.purpuratus |
Hnf6 |
Sp_13D8 |
GFP, Cherry |
|
253kb |
|
|
|
|
S.purpuratus |
Hnf6 |
Sp_079H14_S |
|
|
|
|
|
|
|
S.purpuratus |
Hnf6 |
Sp_088I24_S |
|
|
|
|
|
|
|
S.purpuratus |
Hox1113a_b |
Sp_135O12_L |
GFP |
|
|
|
| |
|
S.purpuratus |
Hox 11/13b |
Sp_103k2 |
GFP |
|
160kb |
|
|
|
|
S.purpuratus |
Hox 11/13b |
Sp_119l11 |
GFP |
|
145kb |
|
|
|
|
S.purpuratus |
Hox 11/13b |
Sp_122G5 |
GFP |
|
160kb |
|
|
|
|
S.purpuratus |
Hox 11/13b |
Sp_135012 |
GFP |
|
105kb |
|
|
|
|
S.purpuratus |
Hox 11/13b |
Sp_142P8 |
GFP,H2B Cerulean |
|
192kb |
|
|
|
|
S.purpuratus |
Hox 11/13b |
Sp_22P14 |
GFP |
|
180kb |
|
|
|
|
S.purpuratus |
Hox 11/13b |
Sp_4005C17 |
GFP, Cherry |
|
142kb |
|
|
|
|
S.purpuratus |
Hox7 |
Sp_13H13 |
GFP |
|
236kb |
|
|
|
|
S.purpuratus |
Hps4L |
Sp_R31111E20 |
|
|
|
WHL22.562382.0 |
SPU_025757 |
|
|
S.purpuratus |
Hypp_2177 |
Sp_R318J6 |
|
|
|
WHL22.643455 |
SPU_027439 |
|
|
S.purpuratus |
Hypp_2998, Hypp_2999 |
Sp_17B17 |
GFP |
145kb |
WHL.22.239379 |
SPU_018406 |
| |
|
S.purpuratus |
Hypp_2998, Hypp_2999 |
Sp_R335J4 |
|
|
145kb |
WHL22.239379 |
SPU_018407 |
Echinobase length: 203kb |
|
S.purpuratus |
Hypp_375 |
Sp_4001C1 ,Sp_1013A10 ,Sp_1108B10 |
|
|
|
WHL22.69123 |
SPU_024491 |
|
|
S.purpuratus |
Ia1 |
Sp_1031P15 |
|
|
|
|
|
|
|
S.purpuratus |
Ia1 |
Sp_75G4 |
cherry |
|
|
|
|
|
|
S.purpuratus |
Id |
Sp_R33120H1 |
|
|
|
SPU_021469 |
| |
|
S.purpuratus |
Id |
Sp_R336E |
|
|
|
SPU_000791 |
| |
|
S.purpuratus |
Ig/Egf/Vwc |
Sp_3080E2,Sp_3037J19 |
|
|
|
WHL22.139301 |
SPU_017202 |
|
|
S.purpuratus |
Inturned |
Sp_14H15, Sp_1102N20 |
GFP |
|
|
WHL22.391869 |
SPU_008070 |
|
|
S.purpuratus |
Ipgm |
Sp_3071M24 |
|
|
|
WHL22.633329,WHL22.633332 |
SPU_010377 |
|
|
S.purpuratus |
Ire1,Ern2L |
Sp_R33118A23 |
GFP |
|
|
WHL22.270316.1 |
SPU_017184 |
|
|
S.purpuratus |
Irxa |
Sp_3094G12 |
|
|
206kb |
|
|
|
|
S.purpuratus |
Kakapo |
Sp_012G10_S |
|
|
|
|
|
|
|
S.purpuratus |
KirrelL |
R3-28J10-14544 |
Cherry, GFP |
|
130kb |
|
|
|
|
S.purpuratus |
Krox |
Sp_163O19 |
GFP |
7093kb |
|
|
| |
|
S.purpuratus |
Lefty |
Sp_3105O6 |
GFP, Cherry |
|
|
|
|
|
|
S.purpuratus |
Lhx2.9 |
Sp_1027H9 |
GFP, Cherry |
|
124kb |
|
|
|
|
S.purpuratus |
Lim |
Sp_108P04_L |
GFP, Cherry |
138kb |
|
|
| |
|
S.purpuratus |
Limk |
Sp_R3_3110L19 |
|
|
|
22.431075.2 |
SPU_022207 |
|
|
S.purpuratus |
Lmo4 |
Sp_1008K19 (or K10?) |
|
|
|
|
|
|
|
S.purpuratus |
Lmo4 |
Sp_3106F20 |
|
|
|
|
|
|
|
S.purpuratus |
Lmo4 |
Sp_3119D15 |
|
|
|
|
|
|
|
S.purpuratus |
Lmpx |
Sp_010A10_L |
|
|
|
|
|
|
|
S.purpuratus |
Lmr |
Sp_4001F24 |
GFP |
|
|
22.327381.0 |
SPU_006026 |
|
|
S.purpuratus |
Lox |
Sp_1004F15 |
cherry |
|
|
|
|
|
|
S.purpuratus |
MitF |
Sp_1103B18 |
GFP |
|
152kb |
WHL.22.677144 |
SPU_008175 |
note |
|
S.purpuratus |
Mrpl12lik |
Sp_R31102E |
|
|
|
SPU_024214 |
Echinobase length: 99kb | |
|
S.purpuratus |
Mrpl2 |
Sp_R33083L1 |
|
|
|
SPU_009141 |
| |
|
S.purpuratus |
Msp130 |
Sp_R32B17, Sp_R3113E14,Sp_R316A11, Sp_R33019H3 |
|
|
|
WHL22.438943 |
SPU_002088 |
|
|
S.purpuratus |
Msp130 |
Sp_R33055B12 |
GFP |
|
135kb |
WHL22.438943 |
SPU_002088 |
|
|
S.purpuratus |
Msp130_1 |
Sp_R32B17 |
|
|
|
|
|
|
|
S.purpuratus |
Msp130_1 |
Sp_R33055B12, Sp_R3113E14,Sp_R316A11 |
|
|
|
|
|
|
|
S.purpuratus |
Msp130r1 |
Sp_R32B17, Sp_R33055B12, Sp_R3113E14,Sp_R316A11 |
|
|
|
WHL22.438976 |
SPU_013822 |
|
|
S.purpuratus |
Msp130r3 |
Sp_R311C23, Sp_R32B17, Sp_R33055B12, Sp_R3113E14,Sp_R316A11 |
|
|
|
WHL22.438997 |
SPU_013823 |
|
|
S.purpuratus |
Msp130related |
Sp_R31021C1 |
|
|
|
SPU_014496 |
| |
|
S.purpuratus |
Msp130related |
Sp_R32B1 |
|
|
|
SPU_013822 |
| |
|
S.purpuratus |
Msp130related |
Sp_R33092L1 |
|
|
|
SPU_015763 |
| |
|
S.purpuratus |
Msp130related |
Sp_R363K2 |
|
|
|
SPU_014492 |
| |
|
S.purpuratus |
Msx |
Sp_R33010N1 |
|
|
|
SPU_020565 |
| |
|
S.purpuratus |
Mt14/MmpL7 |
Sp_4001O12,Sp_3065G23,Sp_37M11 |
|
|
|
WHL22.312130 |
SPU_028750 |
|
|
S.purpuratus |
Mt14/MmpL7 |
Sp_R34001O12 |
|
|
|
WHL22.312033 |
SPU_028748 |
|
|
S.purpuratus |
NA |
Sp_R33071I16 |
|
|
|
WHL22.148948 |
SPU_023291 |
|
|
S.purpuratus |
Nanos2 |
Sp_1111E20 |
GFP |
|
41kb |
|
|
|
|
S.purpuratus |
Nk1 |
Sp_066D22_L |
|
|
|
|
|
|
|
S.purpuratus |
Nk1 |
Sp_142B02_L |
GFP, Cherry |
|
128kb |
|
|
|
|
S.purpuratus |
Nk2.2 |
Sp_4019 C23 |
GFP, Cherry |
|
187kb |
|
|
|
|
S.purpuratus |
Nk7 |
Sp_1029A14 |
GFP |
|
186kb |
WHL22.567485.0 |
SPU_022573 |
|
|
S.purpuratus |
Nk7 |
Sp_115H6,1029A14,40L3,13L2 |
|
|
|
|
|
|
|
S.purpuratus |
Nk7 |
Sp_R340L3 |
GFP |
|
WHL22.567485 |
SPU_022573 |
| |
|
S.purpuratus |
Nkx21 |
Sp_131N15_S |
|
|
|
|
|
|
|
S.purpuratus |
Nkx32 |
Sp_1037P9 |
cherry |
|
|
|
|
|
|
S.purpuratus |
Nodal |
Sp_7F21 |
GFP, RFP |
|
180kb |
|
|
|
|
S.purpuratus |
None |
Sp_R34007M3 |
|
|
|
WHL22.239320 |
SPU_018403 |
|
|
S.purpuratus |
Not |
Sp_157D03_L |
Cherry |
|
162kb |
|
|
|
|
S.purpuratus |
Notch |
Sp_191I13 |
GFP |
|
171kb |
|
|
|
|
S.purpuratus |
Notch |
Sp_R317A1 |
|
|
|
SPU_027006 |
| |
|
S.purpuratus |
Notch |
Sp_191I13_L |
|
|
|
|
| |
|
S.purpuratus |
Npff2L4 |
Sp_115K10 |
GFP |
|
|
WHL.22.523272.0 |
SPU_025314 |
|
|
S.purpuratus |
Nr1 |
Sp_R311I1 |
|
|
|
SPU_028255 |
Echinobase length: 75kb | |
|
S.purpuratus |
Nrl |
Sp_007C10_S |
|
|
|
|
|
|
|
S.purpuratus |
Orct |
Sp_095C14_S |
|
|
|
|
| |
|
S.purpuratus |
Osr |
Sp_63M1 |
GFP |
|
142kb |
|
|
|
|
S.purpuratus |
Otx |
Sp_006F13_L |
GFP |
161kb |
|
|
| |
|
S.purpuratus |
Otx |
Sp_6F13ex6 |
|
|
162kb |
|
|
|
|
S.purpuratus |
P16 |
Sp_1113K17 |
GFP |
|
120kb |
WHL.22.239481 |
SPU_018408 |
|
|
S.purpuratus |
P16 |
Sp_R31037B24 |
|
|
|
WHL22.239481 |
SPU_018408 |
Echinobase length: 148kb |
|
S.purpuratus |
P58_a |
Sp_3027D15 |
GFP |
|
145kb |
WHL.22.23776 |
SPU_00439 |
Echinobase length: 167kb.Same clone and WHL as FcgbpL |
|
S.purpuratus |
P58_a |
Sp_R33077H02 |
|
|
145kb |
WHL22.23776 |
SPU_004159 |
|
|
S.purpuratus |
Pak(p21)ph |
Sp_4004H24 |
GFP |
|
WHL.22.294876 |
SPU_003534 |
| |
|
S.purpuratus |
Pax2/5/8 |
Sp_1038B19 |
|
|
|
|
|
Echinobase length: 83kb |
|
S.purpuratus |
Pax2/5/8 |
Sp_4029I17 |
|
|
|
|
|
|
|
S.purpuratus |
Pbx |
Sp_53H21 |
|
|
|
|
|
|
|
S.purpuratus |
Pdgfr/vegfrL |
Sp_R33090K8 |
|
|
|
WHL22.240520 |
SPU_000310 |
|
|
S.purpuratus |
Pdgfr/vegfrlik |
Sp_R33055P1 |
|
|
|
SPU_021021 |
| |
|
S.purpuratus |
Pks |
Sp_080H21_L |
GFP |
144kb |
|
|
| |
|
S.purpuratus |
Pks |
Sp_085B07_L |
|
|
|
|
|
|
|
S.purpuratus |
PKS |
Sp_80H21 |
|
|
|
SPU_028395 |
| |
|
S.purpuratus |
PKS |
Sp_R321O1 |
|
|
|
SPU_028395 |
| |
|
S.purpuratus |
Plxdc2, Plxdc2_1 |
Sp_3061I23 |
|
|
|
WHL22.605782 |
|
|
|
S.purpuratus |
Pm27 |
Sp_074F08_L |
|
|
|
|
|
|
|
S.purpuratus |
Pm27 |
Sp_140A02_L |
|
|
|
|
|
|
|
S.purpuratus |
Pmar1 |
Sp_R31018E1 |
|
|
|
SPU_015828 |
| |
|
S.purpuratus |
Pmar1 |
Sp_R315A |
|
|
|
SPU_015829 |
| |
|
S.purpuratus |
Pmar1 |
Sp_R34013A1 |
|
|
|
SPU_014721 |
| |
|
S.purpuratus |
Polyabinding |
Sp_073E18_L |
|
|
|
|
|
|
|
S.purpuratus |
Protocad15L |
R31003A8 |
GFP |
|
120kb |
WHL22.138023 |
SPU_003730 |
|
|
S.purpuratus |
Prox |
Sp_3106N18 |
GFP,H2B |
|
186kb |
|
|
|
|
S.purpuratus |
Ptpriz |
Sp_16L6 |
GFP |
|
120kb |
WHL.22.416979.0 |
|
|
|
S.purpuratus |
Ptpriz |
Sp_5E5 |
GFP |
|
WHL.22.416979.0 |
SPU_023115 |
| |
|
S.purpuratus |
RigiL8 |
Sp_7A24, Sp_5B24 |
|
|
|
|
|
|
|
S.purpuratus |
Rx |
Sp_3067M20 or (M10) |
|
|
|
|
|
|
|
S.purpuratus |
Samd9L_2 |
Sp_R31107I17 |
|
|
|
WHL22.254949 |
SPU_005515 |
Echinobase length: 159kb |
|
S.purpuratus |
Sc1 |
Sp_1018N24 |
GFP |
|
122kb |
|
|
|
|
S.purpuratus |
Sc1 |
Sp_175G9 |
GFP |
|
|
|
|
Echinobase length: 159kb |
|
S.purpuratus |
Sc1 |
Sp_3097G9 |
GFP |
|
267kb |
|
|
|
|
S.purpuratus |
Sc1 |
Sp_54D1 |
GFP |
|
|
|
|
|
|
S.purpuratus |
SerpL11 |
Sp_3044E1 |
|
|
|
WHL22.332375 |
SPU_004543 |
|
|
S.purpuratus |
Shr2 |
Sp_20B21 |
|
|
111 |
|
|
|
|
S.purpuratus |
Sip1 |
Sp_4026F15 |
|
|
|
|
|
|
|
S.purpuratus |
Six1/2 |
Sp_1026L10 |
GFP |
|
168kb |
|
|
|
|
S.purpuratus |
Six1/2 |
Sp_3058B7 |
GFP |
|
168kb |
|
|
|
|
S.purpuratus |
Six 3 |
Sp_1040G11 |
|
|
|
|
|
|
|
S.purpuratus |
Six 3 |
Sp_3045N20 |
Cherry |
|
92kb |
|
|
|
|
S.purpuratus |
Six 3 |
Sp_304 N20 |
cherry |
|
92kb |
|
|
|
|
S.purpuratus |
Slc2a5 |
Sp_R35M11 |
GFP |
|
95kb |
WHL22.692383 |
SPU_027868 |
|
|
S.purpuratus |
Sm29 |
Sp_R35D23 |
GFP |
|
60kb |
WHL22.39470 |
SPU_005990 |
|
|
S.purpuratus |
Sm30 |
Sp_R33049J |
|
|
|
SPU_000826 |
| |
|
S.purpuratus |
Sm30 |
Sp_R34009E1 |
|
|
|
SPU_004869 |
| |
|
S.purpuratus |
Sm30c |
Sp_4009E11 |
GFP |
34kb |
|
|
Echinobase length: 80kb | |
|
S.purpuratus |
Sm30c |
Sp_R31019K19 |
|
|
|
WHL22.518121 |
SPU_000827 |
|
|
S.purpuratus |
Sm30E |
Sp_R34009E11 |
GFP |
|
100kb |
WHL22.70610 |
SPU_004867 |
|
|
S.purpuratus |
Sm37 |
Sp_3112c9 |
|
|
|
WHL22.742403 |
|
|
|
S.purpuratus |
Sm50 |
Sp_74F8 |
GFP |
|
144kb |
|
|
|
|
S.purpuratus |
Soxb2 |
Sp_058L24_L |
|
|
|
|
| |
|
S.purpuratus |
Soxc |
Sp_3114N15 |
GFP, Cherry |
|
159kb |
|
|
|
|
S.purpuratus |
Soxe |
Sp_3014I4 |
GFP |
|
110kb |
|
|
|
|
S.purpuratus |
SpClectin |
Sp_R339A20 |
|
|
|
WHL22.728834 |
SPU_007882 |
|
|
S.purpuratus |
SpClectin |
Sp_R34012A17 |
|
|
|
WHL22.728834 |
SPU_007882 |
|
|
S.purpuratus |
Spnsh1 |
Sp_1008F15 |
GFP |
|
|
WHL22.60674.1 |
SPU_000847 |
|
|
S.purpuratus |
SpPpap2b |
Sp_R363M7 |
|
|
|
WHL22.310985 |
SPU_011127 |
|
|
S.purpuratus |
Srcr185 |
Sp_R34014J20 |
|
|
|
WHL22.253874 |
SPU_022285 |
|
|
S.purpuratus |
Synb |
Sp_16D6 |
GFP |
|
130kb |
|
|
|
|
S.purpuratus |
Synb |
Sp_56D3 |
GFP |
|
150kb |
|
|
|
|
S.purpuratus |
Tbrain |
Sp_031J08_L |
GFP, Cherry |
137kb |
|
|
| |
|
S.purpuratus |
Tbx 2/3 |
Sp_45A14 |
GFP |
|
|
|
|
|
|
S.purpuratus |
Tbx6/1 |
Sp_R34002B2 |
|
|
|
SPU_020345 |
| |
|
S.purpuratus |
Tead4 |
Sp_1111C11 |
|
|
|
|
|
|
|
S.purpuratus |
Tel |
Sp_3122C5 |
GFP |
|
|
|
|
|
|
S.purpuratus |
TgfbrtII |
Sp_3054B11, Sp_1035B22(noGFP) |
|
|
|
WHL22.191099.0 |
|
|
|
S.purpuratus |
TgfbrtII |
Sp_R33054B11 |
|
|
|
WHL22.191099.0 |
SPU_017511 |
|
|
S.purpuratus |
Tgif |
Sp_1028K14 |
Cherry |
|
190kb |
|
|
|
|
S.purpuratus |
Tgif |
Sp_3014J14 (or 3114J14?) |
GFP, Cherry |
|
107kb |
|
|
|
|
S.purpuratus |
Tho1 |
Sp_R31037M09 |
|
|
|
WHL22.614092 |
SPU_007382 |
|
|
S.purpuratus |
Tim1 |
Sp_16N12 |
|
|
|
|
|
|
|
S.purpuratus |
Tk8 |
Sp_R315I1 |
|
|
|
|
|
|
|
S.purpuratus |
Tk8 |
Sp_R315I2 |
|
|
|
WHL22.147868 |
SPU_004747 |
|
|
S.purpuratus |
Tk8 |
Sp_R33076H20 |
|
|
|
|
|
|
|
S.purpuratus |
Tk8 |
Sp_R33076M20 |
|
|
|
|
|
|
|
S.purpuratus |
Tk8 |
Sp_R33085F05 |
|
|
|
|
|
|
|
S.purpuratus |
Tll |
Sp_3114F24 |
GFP |
|
11kb |
|
|
|
|
S.purpuratus |
Tmem68 |
Sp_3120J18 |
|
|
|
WHL22.629570 |
SPU_028851 |
|
|
S.purpuratus |
Tob |
Sp_3121D18 |
GFP |
|
|
WHL.22.145164 |
SPU_016792 |
Echinobase length: 110000kb |
|
S.purpuratus |
Tollip_1 |
Sp_R33069K18 |
GFP |
|
|
WHL22.544727 |
SPU_026252 |
|
|
S.purpuratus |
Trim2_1 |
Sp_R34P15 |
|
|
|
WHL22.742590 |
SPU_020546 |
|
|
S.purpuratus |
Trpm3_3 (W06) |
Sp_R344J22 |
GFP |
|
130kb |
WHL22.540206 |
SPU_018142 |
|
|
S.purpuratus |
Trpm3_4 |
Sp_R34H20 |
|
|
|
WHL22.652421 |
SPU_011587 |
|
|
S.purpuratus |
Ubiquitin |
Sp_5B3 |
GFP |
|
150kb |
|
|
|
|
S.purpuratus |
Unc4.1 |
Sp_3005N3 |
|
|
|
|
|
|
|
S.purpuratus |
Unc4.1 |
Sp_3032G21 |
|
|
|
|
|
|
|
S.purpuratus |
Unc4.1 |
Sp_3060A11 |
|
|
|
|
|
|
|
S.purpuratus |
Unc4.1 |
Sp_3060A21 |
|
|
|
|
|
|
|
S.purpuratus |
UnivinBMP2.4 |
Sp_1108 H16 |
|
|
|
|
|
|
|
S.purpuratus |
UnivinBMP2.4 |
Sp_4013 P18 |
|
|
|
|
|
|
|
S.purpuratus |
Vasa |
Sp_1032F3 |
GFP |
|
159kb |
|
|
|
|
S.purpuratus |
Vegf |
Sp_R31109H |
|
|
|
SPU_005737 |
| |
|
S.purpuratus |
Vegf2 |
Sp_3040L10 |
|
|
|
WHL22.194484 |
SPU_005737 |
|
|
S.purpuratus |
Vegf3 Erica |
|
GFP |
|
|
|
|
|
|
S.purpuratus |
Vegf3 Julie |
Sp_4045B11 |
GFP |
|
78kb |
|
|
|
|
S.purpuratus |
VegFr |
Sp_R33007G22 |
|
|
|
WHL22.240520 |
SPU_000310 |
|
|
S.purpuratus |
Vparpf_3 |
Sp_4015K5 |
|
|
|
|
|
|
|
S.purpuratus |
Wnt5 |
Sp_1109L17 |
GFP |
|
135kb |
|
|
|
|
S.purpuratus |
Wnt8 |
Sp_040I09_L|Sp_041A08_S |
GFP |
78kb |
|
|
| |
|
S.purpuratus |
Wnt8 |
Sp_099F11_L |
|
|
|
|
| |
|
S.purpuratus |
Z160 |
Sp_10K16 |
GFP |
|
|
WHL22.6653.0 |
SPU_018075 |
|
|
S.purpuratus |
Z160 |
Sp_3J11, Sp_10K16,Sp_1022C20 |
|
|
|
WHL22.6653 |
SPU_018075 |
|
|
S.purpuratus |
Z166 |
Sp_3086D15 |
GFP |
|
105kb |
|
|
|
|
S.purpuratus |
Z167 |
Sp_15N2 |
|
|
|
|
|
|
|
S.purpuratus |
Z188 |
Sp_3053B21 |
GFP |
|
217kb |
|
|
|
|
S.purpuratus |
Z199 (Sp5) |
Sp_4014H5 |
|
|
|
|
|
|
|
S.franciscanus |
Blimp1 |
Sf_1137N7 |
|
|
|
|
|
|
|
S.franciscanus |
Brachyury |
Sf_124O17 |
GFP |
|
100kb |
|
|
|
|
S.franciscanus |
Brachyury |
Sf_24O7 |
GFP |
|
100kb |
|
|
|
|
S.franciscanus |
Brn1/2/4 |
Sf_13A7, Sf_10K23, Sf_21K17, Sf_33H3, Sf_33H4, Sf_53H1, Sf_56C1, Sf_56N22, Sf_63B19, Sf_68M12, Sf_76C13, Sf_80I21, Sf_82P14 |
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S.franciscanus |
Delta |
Sf_135H4 |
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S.franciscanus |
Dlx |
Sf_126E15 |
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S.franciscanus |
Endo16 |
Sf_140P23 |
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S.franciscanus |
Erg |
Sf_156H6, Sf_61I12, Sf_71H11, Sf_108K22, Sf_114N21, Sf_267G13 |
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S.franciscanus |
Eve |
Sf_113P9 |
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S.franciscanus |
FoxA |
Sf_121I13 |
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S.franciscanus |
Gatae |
Sf_121N5 |
GFP |
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S.franciscanus |
Gatae |
Sf_21N5 Julies list |
GFP |
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S.franciscanus |
Gcm |
Sf_1190M4 |
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S.franciscanus |
Hox11/13b |
Sf_186O23, Sf_114F5, Sf_183B16 |
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S.franciscanus |
IrxA |
Sf_126G6, Sf_56N10 |
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S.franciscanus |
Nk2.2 |
Sf_156K11 70B18 76M21 116N10 |
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S.franciscanus |
Otx |
Sf_148I10 |
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S.franciscanus |
Tbrain |
Sf_1150J8 |
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S.franciscanus |
Wnt8 |
Sf_12H20 |
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P.lividus |
Hbox12 |
Pl_020N20_S |
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P.lividus |
Lim |
Pl_070B09_S |
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P.lividus |
Nodal |
Pl_237K10 (127K10 Julie) |
GFP, Cherry |
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L.variegatus |
Alx1 |
Lv_7 J11 |
GFP |
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162kb |
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L.variegatus |
Apobec |
Lv_031L12_S |
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Echinobase length:51kb | |
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L.variegatus |
Apobec |
Lv_265E21_L |
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L.variegatus |
Apol |
Lv_161M17_S |
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L.variegatus |
Betacatenin |
Lv_048J05_S, Lv_48J5 |
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L.variegatus |
Blimp1 |
Lv_60B16 |
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L.variegatus |
Blimp1/krox |
Lv_060B16_S |
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L.variegatus |
Bmp2/4 |
Lv_048J05_S |
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L.variegatus |
Brachyury |
Lv_104N16_L |
GFP |
139kb |
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L.variegatus |
Brachyury |
Lv_187F03_S |
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L.variegatus |
Brn1 2/4 |
Lv_1I8 |
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L.variegatus |
Brn1 2/4 |
Lv_86D12 |
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L.variegatus |
Capk |
Lv_086E23_L |
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L.variegatus |
Capk |
Lv_177F13_S |
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L.variegatus |
Cyclophillin |
Lv_007J20_L |
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L.variegatus |
Dac |
Lv_259P14, Lv_263F11 |
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L.variegatus |
Decorin |
Lv_114C22_S |
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L.variegatus |
Delta |
Lv_129M22_L |
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L.variegatus |
Delta |
Lv_020B17_S |
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L.variegatus |
Delta |
Lv_174J14_S |
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L.variegatus |
Dlx |
Lv_17M23, Lv_93K13 |
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L.variegatus |
Dopt |
Lv_037C14_S |
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L.variegatus |
Dri |
Lv_6L12, Lv_147N11 |
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Echinobase length:169kb.80130 smear |
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L.variegatus |
Ecr |
Lv_232F19 |
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L.variegatus |
Endo16 |
Lv_199M10_L |
GFP |
22kb |
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L.variegatus |
Ese |
Lv_260N2 |
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L.variegatus |
Ets1 |
Lv_31F19 |
GFP |
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132kb |
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L.variegatus |
Eve |
Lv_112E15_S |
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L.variegatus |
Fmo2 |
Lv_223C01 |
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Echinobase length:167kb.Same clone and WHL as P58a | |
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L.variegatus |
Fmo3 |
Lv_213G22 |
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L.variegatus |
Foxa |
Lv_004G18_S |
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L.variegatus |
Foxa |
Lv_46J3 |
GFP |
133kb |
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L.variegatus |
Foxb |
Lv_092H22_S |
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L.variegatus |
Foxg |
Lv_15K23 |
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L.variegatus |
Foxk |
Lv_186I1 |
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L.variegatus |
Foxn2/3 |
Lv_206M1; Lv_206C22: Lv_217D12 |
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L.variegatus |
Foxo |
Lv_13C1; Lv_192P13 |
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L.variegatus |
Gatac |
Lv_044D13_S |
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L.variegatus |
Gatac |
Lv_43P8 |
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L.variegatus |
Gatae |
Lv_159L22_L |
GFP |
135kb |
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L.variegatus |
Gatae |
Lv_032P20_S |
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L.variegatus |
Gcm |
Lv_018J03_S |
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L.variegatus |
Gelsolin |
Lv_066E20_S |
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L.variegatus |
Gsc |
Lv_157F2; Lv_188E3 |
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L.variegatus |
Hes |
Lv_091N14_S |
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L.variegatus |
Hmx |
Lv_076P20_S |
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L.variegatus |
Hnf1 |
Lv_252B16; 252C17 |
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L.variegatus |
Hnf6 |
Lv_015K10_S |
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L.variegatus |
Hox1113a |
Lv_235L15 |
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L.variegatus |
Hox1113b |
Lv_235L15_S |
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L.variegatus |
IrxA |
Lv_275N21 |
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L.variegatus |
Kakapo |
Lv_033E22_X |
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L.variegatus |
Kakapo |
Lv_229D15_S |
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L.variegatus |
Lim1 |
Lv_097A18_S |
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L.variegatus |
Nfe2 |
Lv_12M23; Lv_23F8; Lv_28N3 |
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L.variegatus |
Nfkb |
Lv_96M23 |
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L.variegatus |
Nk1 |
Lv_125K05_L |
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L.variegatus |
Nk2.2 |
Lv_261O1; Lv_266P4; Lv_271G24 |
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L.variegatus |
Nodal |
Lv_169O12 |
GFP |
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L.variegatus |
Not |
Lv_219N08_S |
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L.variegatus |
Notch |
Lv_030M02_L |
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L.variegatus |
Notch |
Lv_097A07_S |
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L.variegatus |
Nrl |
Lv_024M04_S |
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L.variegatus |
Otx |
Lv_229L05_S |
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L.variegatus |
Pks |
Lv_053J24_S |
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L.variegatus |
Pm27 |
Lv_188D08_L |
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L.variegatus |
Pmar1 |
Lv_170H13_S |
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L.variegatus |
Profilin |
Lv_048B05_S |
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L.variegatus |
Prox |
Lv_37H6; Lv_39I5; Lv_171G6 |
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L.variegatus |
Sip1 |
Lv_99D3; Lv_101P20; Lv_253P19 |
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L.variegatus |
Six1/2 |
Lv_58E21 |
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L.variegatus |
Snail (Z88) |
Lv_9B9 |
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L.variegatus |
SoxB1 |
Lv_153I1; 187G6 |
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L.variegatus |
Soxc |
Lv_208L03_S |
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L.variegatus |
Tbr |
Lv_192 I24 |
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L.variegatus |
Tbrain |
Lv_192I24_S |
GFP |
551kb |
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L.variegatus |
Tbx2/3 |
Lv_53J19; Lv_56A3 |
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L.variegatus |
Tel |
Lv_270E1 |
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L.variegatus |
Wnt5 |
Lv_036N14_S |
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L.variegatus |
Wnt8 |
Lv_064C04_L |
GFP |
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127kb |
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L.variegatus |
Wnt8 |
Lv_183H12_S |
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L.variegatus |
Z13 |
Lv_10B12 |
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E.tribuloides |
Eve |
Et_161A22 |
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120kb |
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A.punctulata |
Brachyury |
Ap_144G2 |
GFP |
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169kb |
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A.punctulata |
Delta |
Ap_158F20 |
GFP |
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36kb |
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A.punctulata |
Eve |
Ap_159E4 |
GFP |
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120kb |
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A.punctulata |
Foxa |
Ap_66L2 |
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A.punctulata |
Foxa |
Ap_176M11_L |
GFP |
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133kb |
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A.punctulata |
Gatac |
Ap_149G11 |
GFP |
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104kb |
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A.punctulata |
Gatae |
Ap_99O22 |
GFP |
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145kb |
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A.punctulata |
Gcm |
Ap_73C21 |
GFP |
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119kb |
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A.punctulata |
Otx |
Ap_22F20 |
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A.punctulata |
Otx |
Ap_46D17 |
GFP |
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A.punctulata |
Tbrain |
Ap_10E23 |
GFP |
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A.punctulata |
Wnt8 |
Ap_38E20 |
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P.miniata |
Brachyury |
Am_187C19_S |
GFP |
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90kb |
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P.miniata |
Delta |
Am_30B2 |
GFP |
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150kb |
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P.miniata |
Foxa |
Am_146M24 |
GFP |
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90kb |
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P.miniata |
Gatae |
Am_185N5 |
GFP |
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150kb |
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P.miniata |
Gatae |
Am_185F05_L |
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P.miniata |
Gatae |
Am_208B02_S |
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P.miniata |
Otx |
Am_116H21_L |
GFP |
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169kb |
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P.miniata |
Soxc |
24A4 |
GFP |
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P.miniata |
Soxc |
67M9 |
GFP |
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P.miniata |
Tbr |
Sp_128I20 |
GFP |
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