ECB-FEAT-23102334: Difference between revisions
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[[Category:Genes]]<small>Page automatically generated by ECB_legacy_importer Wed Jan 18 09:57:12 2023 </small> | [[Category:Genes]]<small>Page automatically generated by ECB_legacy_importer Wed Jan 18 09:57:12 2023 </small> | ||
===SPU_020110 (<i>Strongylocentrotus purpuratus</i> Genome assembly v.3.1)=== | |||
This model overlaps SPU_004148, Sp-Krl, on the Spur3.1 assembly, but differs at the 5prime end which results in the loss of some zinc finger domains from the predicted peptide. The predicted peptide is less similar than SPU_004148 to the SpKrl sequence submitted to GenBank (protein accession AAG31160.1). | |||
===SPU_021947 (<i>Strongylocentrotus purpuratus</i> Genome assembly v.3.1)=== | |||
The retired duplicate of this GLEAN prediction model, SPU_006421 (Sp-Z13), was designated Sp-Krl in PMID: 16997293. This model is 85% identical at the predicted amino acid level to the SpKrl sequence submitted to GenBank (protein accession AAG31160.1). SPU_021947 on Spur3.1 Scaffold2566 is also similar to AAG31160.1, and was designated Sp-Krl during the original annotation of the S. purpuratus genome. | |||
Latest revision as of 10:31, 18 January 2023
Page automatically generated by ECB_legacy_importer Wed Jan 18 09:57:12 2023
SPU_020110 (Strongylocentrotus purpuratus Genome assembly v.3.1)
This model overlaps SPU_004148, Sp-Krl, on the Spur3.1 assembly, but differs at the 5prime end which results in the loss of some zinc finger domains from the predicted peptide. The predicted peptide is less similar than SPU_004148 to the SpKrl sequence submitted to GenBank (protein accession AAG31160.1).
SPU_021947 (Strongylocentrotus purpuratus Genome assembly v.3.1)
The retired duplicate of this GLEAN prediction model, SPU_006421 (Sp-Z13), was designated Sp-Krl in PMID: 16997293. This model is 85% identical at the predicted amino acid level to the SpKrl sequence submitted to GenBank (protein accession AAG31160.1). SPU_021947 on Spur3.1 Scaffold2566 is also similar to AAG31160.1, and was designated Sp-Krl during the original annotation of the S. purpuratus genome.