ECB-FEAT-23032114: Difference between revisions

From EchinoWiki
Jump to navigation Jump to search
No edit summary
No edit summary
 
(2 intermediate revisions by the same user not shown)
Line 2: Line 2:
===SPU_017846 (<i>Strongylocentrotus purpuratus</i> Genome assembly v.3.1)===
===SPU_017846 (<i>Strongylocentrotus purpuratus</i> Genome assembly v.3.1)===
The peptide predicted by this model in the Spur3.1 assembly than is shorter than that of the original GLEAN prediction generated against Spur0.5.
The peptide predicted by this model in the Spur3.1 assembly than is shorter than that of the original GLEAN prediction generated against Spur0.5.
===SPU_017849 (<i>Strongylocentrotus purpuratus</i> Genome assembly v.3.1)===
The original GLEAN prediction of this model made against the Spur0.5 assembly predicted a larger peptide; on the Spur3.1 assembly this model is disrupted by scaffold gaps resulting in missing sequence (The model contains multiple non-consensus splice sites next to scaffold gaps). <br>Part of the peptide predicted by this model is near identical to that predicted by SPU_017846 (Sp-Z313) on Spur3.1 Scaffold434; potential redundancy in the assembly.
===SPU_017850 (<i>Strongylocentrotus purpuratus</i> Genome assembly v.3.1)===
This model has been integrated into SPU_017846, Sp-Z313.
===SPU_017847 (<i>Strongylocentrotus purpuratus</i> Genome assembly v.3.1)===
This model has been integrated into SPU_017846

Latest revision as of 10:47, 18 January 2023

Page automatically generated by ECB_legacy_importer Wed Jan 18 09:57:12 2023

SPU_017846 (Strongylocentrotus purpuratus Genome assembly v.3.1)

The peptide predicted by this model in the Spur3.1 assembly than is shorter than that of the original GLEAN prediction generated against Spur0.5.

SPU_017849 (Strongylocentrotus purpuratus Genome assembly v.3.1)

The original GLEAN prediction of this model made against the Spur0.5 assembly predicted a larger peptide; on the Spur3.1 assembly this model is disrupted by scaffold gaps resulting in missing sequence (The model contains multiple non-consensus splice sites next to scaffold gaps).
Part of the peptide predicted by this model is near identical to that predicted by SPU_017846 (Sp-Z313) on Spur3.1 Scaffold434; potential redundancy in the assembly.

SPU_017850 (Strongylocentrotus purpuratus Genome assembly v.3.1)

This model has been integrated into SPU_017846, Sp-Z313.

SPU_017847 (Strongylocentrotus purpuratus Genome assembly v.3.1)

This model has been integrated into SPU_017846