Endomes QPCR: Difference between revisions
imported>BArsh |
imported>Ctelmer |
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= QPCR Data Relevant to Endomesoderm Network = | = QPCR Data Relevant to Endomesoderm Network = | ||
<p>Note that the gene names listed in the table have been updated according to nomenclature guidelines and may have changed on the gene pages in Echinobase, however, they are listed as synonyms and the gene pages can be found by searching for the name listed in the table.</p> | |||
== Perturbation Ct:[Ub-C]-[Ub-Exp] == | == Perturbation Ct:[Ub-C]-[Ub-Exp] == | ||
Latest revision as of 11:30, 14 April 2020
QPCR Data Relevant to Endomesoderm Network
Note that the gene names listed in the table have been updated according to nomenclature guidelines and may have changed on the gene pages in Echinobase, however, they are listed as synonyms and the gene pages can be found by searching for the name listed in the table.
Perturbation Ct:[Ub-C]-[Ub-Exp]
May 18, 2010
Ub, ubiquitin mRNA control used for internal standardization; CT, cycle no. at threshold; C, control embryo sample; Exp, sample from perturbed embryos. The quantity of transcript at any point in the reaction is I(1.94CT), where I is the initial amount in the reaction mixture. A positive number means the number of transcripts is increased by the perturbation; a negative number means the number of transcripts is decreased. Data are listed that are considered significant where significant means more than three-fold increase or decrease from control transcript levels (normalized CT difference from control is <-1.6 or >+1.6). Smaller effects are shown as "NS", except where individual NS data are included together with other significant measurements to display scatter or inconsistencies amongst different batches of cDNA. Commas separate replicate measurements in the same cDNA batch; slashes indicate different batches of cDNA from independent experiments.
Abbreviations
MASO: Morpholino-substituted antisense oligo nucleotide
MOE: Messenger RNA overexpression
EN: Engrailed repressor domain
| Gene | Perturbation | 12-16 h | 17-21 h | 23-28 h | 30-36 h | 41-48 h | 60-72 h | Data of: |
|---|---|---|---|---|---|---|---|---|
| alx124 |
Pmar1 MOE |
+4.4/+4.7 |
+3.2/+5.8 |
K. Young, L. Vega & P. Oliveri | ||||
|
Cad MOE |
-5.3/-4.8 |
-5.2/-3.2 |
K. Young, L. Vega & P. Oliveri | |||||
|
Pmar1 MOE + Cad MOE |
+3.1/+3.9 |
+4.3/+7.5 |
K. Young, L. Vega & P. Oliveri | |||||
|
Pmar1-En |
+2.4/+2.3 |
+2.0/+2.9 |
K. Young, L. Vega & P. Oliveri | |||||
|
Pmar1-En + Cad MOE |
+2.5 |
+2.6/+4.3 |
K. Young, L. Vega & P. Oliveri | |||||
|
Alx1 MASO |
+1.9,+1.7/+1.6/NS/+2.2/NS/NS/NS |
NS,NS/+1.9/NS/NS/NS/NS/NS |
P. Oliveri, L. Vega, Q. Tu & J. Yun | |||||
|
Soxb1 MOE26 |
-3.1,-3.1 |
NS,NS |
NS,NS |
L. Chen | ||||
|
Ets1 MASO |
NS/NS |
NS,NS/NS/NS/NS/NS |
-3.6/-1.8/-2.0,NS/-1.7/-1.95/-2.58/NS |
P. Oliveri, L. Vega, Q. Tu & J. Yun | ||||
|
Snail MASO48 |
NS/NS/NS |
S. Wu & D. McClay | ||||||
|
Tgif MASO |
NS/NS/NS/NS/NS/NS/NS/NS |
(-2.41/NS/-2.49/NS/NS/NS/-2.05/NS[24 h])(NS/NS/NS/NS[27 h]) |
Q. Tu, P. Oliveri, J. Yun & I. Peter | |||||
|
Tel MASO |
+1.63/NS/NS |
NS/NS/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
FoxN2/3 MASO |
NS/+2.0/NS |
NS/NS/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Hex MASO |
+2.02/+2.27/NS |
NS/NS/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Erg MASO |
+3.11/NS/+3.34/NS/NS |
NS/NS/NS/NS/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Blimp1b MASO |
NS/NS/+1.67/+1.94/NS |
(NS/NS/NS/NS/NS[24 h])(NS/NS/NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Bra MASO |
NS/NS/NS/+1.83 |
(NS/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
N MASO |
NS/NS/NS |
(NS/NS/NS/+1.65[24 h])(NS/NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Myc MASO |
NS/NS/NS/NS |
(NS/-1.91/NS/NS[24 h])(NS/NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Dac MASO |
NS/NS/NS/NS |
(NS/-1.62/NS/NS[24 h])(NS/NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
| blimp1a |
Brn1/2/4 MASO |
-4.4 |
C. Yuh | |||||
| blimp1b |
Blimp1b MASO |
+2.1,+1.8 |
NS/NS/NS/NS/NS/NS/NS/+1.57/+1.77/NS |
(NS/+1.86/NS/+1.86/+1.58[24 h])(NS/+1.83/NS/NS[27 h])NS/NS |
+2.3 |
C. Livi, I. Peter & J. Yun | ||
|
Blimp1b-En |
-4.0,-4.8 |
-7.8,-8.0 |
-7.4,-5.0/-5.3/-2.1,-2.2 |
C. Livi | ||||
|
Cad MOE |
-5.9/-4.8/-4.2 |
-4.6/-7.8 |
-5.1/-14.3/-4.6 |
A. Ransick, T. Minokawa, P. Oliveri & L. Vega | ||||
|
Otx-En |
-2.3/-1.6 |
NS/NS/NS |
-2.5/-3.3/NS |
A. Ransick & T. Minokawa | ||||
|
Eve MASO |
NS/NS/NS |
NS/-2.44/NS |
(-2.12/NS/-3.34[24 h])(-3.13/-3.69/-1.74[27 h])-1.9,-2.2 |
A. Ransick, C. Livi & I. Peter | ||||
|
Pmar1 MOE |
-2.6 |
P. Oliveri & L. Vega | ||||||
|
Wnt8 MASO |
(NS,-2.6,-2.1 (12 h)[12 h])(-2.8,NS,-3.1 (16 h)[16 h]) |
J. Smith | ||||||
|
Tgif MASO |
NS/NS/NS/NS |
(-1.72/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
N MASO |
+2.35/+1.94/NS |
(+2.0/NS/NS/NS[24 h])(+1.85/NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Krl MASO |
NS/NS/NS/-1.94 |
(NS/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
GataE MASO |
NS/NS/NS/NS |
(NS/NS/NS/-2.22[24 h])(NS/NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Hox11/13b MASO |
NS/-1.93/-1.47 |
(-2.05/-2.0/-1.86[24 h])(-1.77/-1.6/-2.23[27 h]) |
I. Peter | |||||
| bra |
GataE MASO |
-2.8,-2.4/-2.8,-3.2/-1.6 |
-1.6,NS/-3.3,-3.2/-2.1,-2.2 |
-2.8 |
P. Y. Lee & C. Yuh | |||
|
Blimp1b-En |
-2.0,-3.3 |
-9.0,-9.0 |
-5.2,-5.5/-5.0/-2.3 |
C. Livi | ||||
|
FoxA MASO |
NS/NS |
(NS[24 h])(NS[27 h])NS/NS/NS |
+1.6/+1.6/+2.1 |
NS/NS |
P. Oliveri, I. Peter & J. Yun | |||
|
Cad MOE |
NS/NS |
-4.7/-2.1 |
-4.4/-3.0/-2.4 |
A. Ransick, T. Minokawa & C. Livi | ||||
|
Elk-En |
-3.2,-2.2,-4.1 |
M. Arnone | ||||||
|
Otx-En |
-2.5/-3.4/-4.3/-8.2 |
-2.4/-2.0/-5.2/-4.6 |
A. Ransick & T. Minokawa | |||||
|
Hox11/13b MASO |
-3.0/-2.18/-2.52 |
(-2.21/-2.11/NS[24 h])(-1.9/-3.34/-2.19[27 h])+1.9/NS |
NS |
C. Arenas-Mena & I. Peter | ||||
|
Soxb1 MOE26 |
NS,NS |
-2.9,-3.4 |
L. Chen | |||||
|
Tgif MASO |
NS/NS/NS/NS |
(NS/-1.74/NS/NS[24 h])(NS/NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Bra MASO |
-1.66/NS/NS/NS |
(NS/NS/-2.87/NS[24 h])(NS/NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Eve MASO |
NS/NS |
NS/NS |
(NS/-1.75/NS[24 h])(NS/NS/NS[27 h]) |
I. Peter | ||||
| Brn1/2/4 |
Otxb1/2 MASO |
NS |
-1.7/NS/-2.5/-1.7/NS |
C. Yuh | ||||
|
Dac MASO |
NS/NS |
(NS/NS[24 h])(-3.06/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Tgif MASO |
NS/NS |
(NS/NS[24 h])(-2.48/-2.83[27 h]) |
I. Peter & J. Yun | |||||
|
Krl MASO |
NS/NS/NS |
(NS/NS/NS[24 h])(NS/-2.47/-2.38[27 h]) |
I. Peter & J. Yun | |||||
|
Blimp1b MASO |
NS/NS/NS |
(NS/NS/NS[24 h])(-1.73/-3.24/-2.19[27 h]) |
I. Peter & J. Yun | |||||
|
Myc MASO |
NS/NS |
(NS/NS[24 h])(-2.14/-3.77[27 h]) |
I. Peter & J. Yun | |||||
|
GataE MASO |
NS/NS/NS |
(NS/NS/NS[24 h])(-2.86/-1.74/-2.47[27 h]) |
I. Peter & J. Yun | |||||
|
Bra MASO |
NS/NS |
(NS/NS[24 h])(-2.63/-2.6[27 h]) |
I. Peter & J. Yun | |||||
|
Eve MASO |
NS/NS |
NS/NS/NS |
(NS/NS/NS[24 h])(-1.88/-2.72/-2.01[27 h]) |
I. Peter | ||||
|
Otxa MASO |
NS/NS/NS |
(NS/NS/NS[24 h])(-1.66/-2.78/-2.82[27 h]) |
I. Peter | |||||
|
SoxC MASO |
NS/NS/NS |
(NS/NS/NS[24 h])(NS/NS/-2.05[27 h]) |
I. Peter | |||||
|
OtxHD MASO |
NS/NS/NS |
(NS/NS/NS[24 h])(NS/-1.36/-2.03[27 h]) |
I. Peter | |||||
| capk |
Bra MASO1 |
-1.7 |
J. Rast | |||||
| cyclophillin |
Pmar1 MOE |
+3.3 |
+5.5 |
P. Oliveri | ||||
|
Pmar1-En |
NS |
+3.4 |
P. Oliveri | |||||
|
Dri MASO |
-2.6/-2.7 |
-3.6/NS/-1.8/NS/NS/NS |
NS/NS/NS |
G. Amore, Q. Tu, P. Oliveri & J. Yun | ||||
|
Dri-En |
-1.8/-2.4 |
G. Amore | ||||||
|
Gsc MASO38 |
-2.4,NS |
NS/-1.9 |
G. Amore | |||||
|
Soxb1 MOE26 |
-3.6,-7.3/-2.2,-1.7 |
L. Chen | ||||||
|
Soxb1-En |
-3.9,-2.6 |
L. Vega & W. Chiu | ||||||
|
Ets1 MASO |
-3.12,-3.03/NS/-1.84/NS/-2.17/-4.04 |
-3.02,-3.6/-3.25/NS/-2.39/-2.34/-2.56/-2.07 |
P. Oliveri, Q. Tu & J. Yun | |||||
|
Alx1 MOE |
-2.56,-2.46/NS |
-2.81,-3.4/NS/NS |
P. Oliveri | |||||
|
Ets1 MASO + Alx1 MOE |
-5.31,-5.22/-3.7 |
-5.47,-6.05/-3.69/-3.57 |
P. Oliveri | |||||
|
Hex MASO |
NS/NS/NS |
NS/-1.91/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Erg MASO |
NS/NS/NS/NS/-1.68 |
NS/NS/NS/NS/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
| dac |
Dac MASO |
NS/NS/NS/NS |
(NS/NS/NS/NS[24 h])(+1.61/+1.64/NS/+1.67[27 h]) |
I. Peter & J. Yun | ||||
|
Otxa MASO |
NS/+1.97/NS |
(NS/NS/NS[24 h])(NS/NS/NS[27 h]) |
I. Peter | |||||
|
Eve MASO |
NS/NS |
NS/NS/NS |
(NS/NS/NS[24 h])(NS/-1.64/NS[27 h]) |
I. Peter | ||||
| delta |
Cad MOE |
-3.3/-3.9 |
-1.6/NS |
NS/-1.9 |
A. Ransick & T. Minokawa | |||
|
Pmar1 MOE |
+1.8/+3.2 |
+2.6/+2.6 |
P. Oliveri | |||||
|
Pmar1-En |
+1.8/+2.0 |
+3.1/+2.0 |
P. Oliveri | |||||
|
Soxb1 MOE26 |
-3.7,-3.3 |
-1.8,-2.4 |
-2.3,-2.2/NS |
L. Chen | ||||
|
Tel MASO |
+1.81/NS/NS |
NS/NS/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
FoxN2/3 MASO |
NS/NS/NS |
+1.63/NS/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Hex MASO |
NS/NS/NS |
NS/+1.78/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
N MASO |
NS/-1.74/NS |
(NS/NS/NS/-1.92[24 h])(NS/NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Eve MASO |
NS/NS |
NS/NS/NS |
(-1.62/NS/NS[24 h])(NS/NS/NS[27 h]) |
I. Peter | ||||
|
Otxa MASO |
NS/+1.82/NS |
(NS/NS/NS[24 h])(NS/NS/NS[27 h]) |
I. Peter | |||||
| dpt |
Bra MASO1 |
-6.8 |
J. Rast | |||||
|
DnN MOE8 |
-1.7 |
C. Calestani | ||||||
|
Elk-En5 |
-2.1,-2.2,-4.6 |
M. Arnone | ||||||
|
Krl MASO18, 26 |
-3.8/-3.8 |
NS/NS |
-3.1/-2.8/-2.0,-1.6 |
C. Livi | ||||
|
Gcm MASO |
-2.6 |
-5.7/-3.6 |
A. Ransick | |||||
| dri |
Pmar1 MOE |
+3.6 |
+6.7 |
P. Oliveri | ||||
|
Pmar1-En |
+2.4 |
+7.2 |
P. Oliveri | |||||
|
Dri MASO20 |
NS/NS/NS/NS/NS |
NS/NS/NS/NS/NS |
-1.8/-4.5 |
G. Amore, Q. Tu, P. Oliveri & J. Yun | ||||
|
Alx1 MASO |
-4.8,-3.6/-4.1/-3.1/-1.8/-3.88/-3.16/-4.26 |
-1.9/-2.9/NS/-2.94/-3.4/-2.91 |
P. Oliveri, Q. Tu & J. Yun | |||||
|
Ets1 MASO42 |
-2.8/-3.6/-5.17,-5.83/-2.76/-3.4,-2.58/-4.86/-4.58/-2.58/-4.25 |
-1.7/-2.3/-3.57,-2.12/-2.32/-2.17,-2.97/-3.55/-4.46/-3.12/-2.51 |
P. Oliveri, Q. Tu & J. Yun | |||||
|
Soxb1 MOE26 |
-3.0,-3.4 |
-2.9,-5.1 |
L. Chen | |||||
|
Tbr MASO42 |
NS/NS/+1.6/+2.8/+2.0/NS/NS/NS |
+2.1/NS/+2.0/+1.6/NS/NS |
P. Oliveri, L. Vega, Q. Tu & J. Yun | |||||
|
Alx1 MOE |
NS,NS/NS/-2.44,-1.62 |
NS,NS/+2.26/NS,NS |
P. Oliveri | |||||
|
Ets1 MASO + Alx1 MOE47 |
-1.85,-2.51/NS/-5.53,-4.7 |
-3.39,-1.93/NS/-4.41,-5.21 |
P. Oliveri | |||||
|
Tgif MASO |
NS/NS/NS/NS |
NS/NS/NS/-1.74 |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Erg MASO |
-1.83/NS/-2.17/NS/NS |
NS/NS/NS/NS/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
| elk |
Dac MASO |
+2.49/+2.24/+1.52/+1.46 |
(NS/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h]) |
I. Peter & J. Yun | ||||
|
Blimp1b MASO |
NS/NS/NS/NS/NS |
(NS/NS/NS/NS/NS[24 h])(NS/-3.42/NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Krl MASO |
NS/NS/NS/NS |
(NS/NS/NS/NS[24 h])(NS/-2.0/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Bra MASO |
+1.51/NS/+1.72/NS |
(NS/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
N MASO |
NS/NS/NS |
(NS/NS/NS/NS[24 h])(NS/-2.06/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Myc MASO |
+1.43/NS/NS/+2.49 |
(NS/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Otxa MASO |
NS/+2.59/NS |
(NS/NS/NS[24 h])(NS/NS/NS[27 h]) |
I. Peter | |||||
|
Eve MASO |
NS/NS |
NS/NS/NS |
(NS/NS/NS[24 h])(NS/-1.6/NS[27 h]) |
I. Peter | ||||
| endo16 |
Otx-En |
-1.6 |
-4.2 |
-3.1/-4.3/-6.6 |
A. Ransick & T. Minokawa | |||
|
GataE MASO |
NS/NS/-2.6/NS/NS/NS/NS |
(NS/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h])-2.8,-3.5/-2.7,-1.8 |
-2.3 |
P. Y. Lee, C. Yuh, I. Peter & J. Yun | ||||
|
Hox11/13b MASO |
-2.48/-1.75/NS |
(NS/NS/-2.73[24 h])(NS/NS/-1.86[27 h])NS/+1.6/+2.3 |
NS |
C. Arenas-Mena & I. Peter | ||||
|
Krl MASO18,26 |
-2.59/-2.57/NS/NS |
(NS/NS/NS/-1.6[24 h])(NS/-2.01/NS/NS[27 h])-4.0,-3.3/-2.5,-2.5/NS |
C. Livi, L. Chen, I. Peter & J. Yun | |||||
|
Cad MOE10 |
-2.9/NS |
-6.2/-2.3 |
-5.2/-2.2 |
A. Ransick & T. Minokawa | ||||
|
FoxA MASO |
NS/NS/NS/NS |
(NS/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h]) |
-3.9,-2.7 |
K. Young, P. Oliveri, I. Peter & J. Yun | ||||
|
N MASO |
-1.71/NS/-1.46 |
(NS/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h]) |
-1.7 (29 h) |
C. Calestani, I. Peter & J. Yun | ||||
|
Soxb1 MOE26 |
-4.5,-5.7 |
-7.6,-9.9 |
L. Chen | |||||
|
Blimp1b MASO |
NS/-3.97/-2.02/NS/-3.26 |
(-2.54/NS/-3.27/NS/-3.8[24 h])(NS/NS/-3.78/-3.88/-1.9[27 h]) |
I. Peter & J. Yun | |||||
|
Bra MASO |
-1.82/-2.22/-2.13/-2.4 |
(-2.01/NS/NS/NS[24 h])(NS/NS/-1.86/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Dac MASO |
NS/-2.12/-2.93/-2.14 |
(NS/-1.97/NS/NS[24 h])(NS/NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Eve MASO |
NS/NS |
NS/NS |
(NS/NS/-1.86[24 h])(-2.16/-1.78/NS[27 h]) |
I. Peter | ||||
|
OtxHD MASO |
-1.99/-1.75/NS |
(-2.03/NS/-2.08[24 h])(NS/NS/-1.97[27 h]) |
I. Peter | |||||
| ephx |
Bra MASO1 |
-3.8 |
J. Rast | |||||
| erg |
Hex MASO |
-2.16/NS/-1.94 |
NS/NS/-2.83 |
Q. Tu, P. Oliveri & J. Yun | ||||
|
Ets1 MASO |
-1.86/-1.77/-1.73/-2.25 |
-1.75/-1.99/-2.46/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Tbr MASO |
NS/-1.55/-2.79 |
-2.19/NS/-3.19 |
Q. Tu, P. Oliveri & J. Yun | |||||
|
FoxN2/3 MASO |
NS/-2.22/NS |
NS/NS/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Tgif MASO |
-1.64/NS/-1.69/NS |
NS/NS/NS/-1.76 |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Erg MASO |
NS/NS/-2.37/NS/NS |
NS/NS/NS/NS/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
| ets1 |
Pmar1 MOE |
NS |
+5.4 |
P. Oliveri | ||||
|
Pmar1-En |
NS |
+4.5 |
P. Oliveri | |||||
|
Soxb1 MOE26 |
NS,NS |
-2.0,-1.9 |
-2.1,-2.1 |
L. Chen | ||||
|
Snail MASO48 |
NS/NS,NS/NS |
S. Wu & D. McClay | ||||||
|
FoxN2/3 MASO |
NS/+2.71/NS |
NS/NS/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Ets1 MASO |
NS/+1.8/NS/NS |
NS/NS/NS/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Hex MASO |
NS/+3.33/NS |
NS/NS/+1.84 |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Erg MASO |
+2.85/NS/+3.47/NS/NS |
NS/NS/NS/NS/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
| eve |
Blimp1b MASO |
-2.3,-3.0 |
-1.6,-1.7,-2.7,-2.3 |
NS/NS/NS |
C. Livi, I. Peter & J. Yun | |||
|
Blimp1b-En |
NS |
-4.4,-4.3 |
-2.8,-4.3/-5.3 |
C. Livi | ||||
|
Cad MOE |
-6.3,-4.9/-3.9 |
-5.2,-4.0/-3.1 |
-5.5,-4.3/-4.6 |
A. Ransick & T. Minokawa | ||||
|
Otx-En12 |
-2.9/NS |
A. Ransick & T. Minokawa | ||||||
|
Soxb1 MASO26 |
-2.0/NS,-2.0,-1.8/NS/-2.7 |
-2.1/NS |
NS |
C. Livi, J. Rast & K. Young | ||||
|
Hox11/13b MASO |
NS/NS/NS |
(NS/NS/NS[24 h])(NS/NS/NS[27 h])NS/+1.9 |
C. Arenas-Mena & I. Peter | |||||
|
Soxb1 MOE26, 41 |
-2.1,-1.9 |
NS,-3.0 |
-4.1,-4.2 |
L. Chen | ||||
|
Eve MASO |
+2.8/NS/+3.45/+3.31 |
+2.0/NS/+2.58/+1.63/+2.39 |
(NS/+1.67/NS[24 h])(NS/NS/+1.64[27 h])NS/+2.2 |
A. Ransick, C. Livi & I. Peter | ||||
|
Pmar1 MOE |
-4.7 |
P. Oliveri & L. Vega | ||||||
|
Cad MOE |
-3.7 |
P. Oliveri & L. Vega | ||||||
|
Pmar1 MOE + Cad MOE |
-2.2 |
P. Oliveri & L. Vega | ||||||
|
Pmar1-En + Cad MOE |
-6.7 |
P. Oliveri & L. Vega | ||||||
|
Pmar1-En |
-7.9 |
P. Oliveri & L. Vega | ||||||
|
Brn1/2/4 MASO |
-5.7/NS |
C. Yuh | ||||||
| ferritin |
Hox11/13b MASO |
NS/NS/+2.1 |
NS |
C. Arenas-Mena | ||||
| ficolin |
Bra MASO1 |
-1.7 |
J. Rast | |||||
|
Pmar1 MOE |
+4.0 |
+5.9 |
P. Oliveri | |||||
|
Pmar1-En |
NS |
+3.1 |
P. Oliveri | |||||
|
Dri MASO |
-3.6/NS/-2.7,-4.6 |
NS/NS/-1.8/-2.5/NS/NS/NS |
NS/NS/NS |
G. Amore, Q. Tu, P. Oliveri & J. Yun | ||||
|
Dri-En |
-4.6/-3.0 |
G. Amore | ||||||
|
Hnf6 MASO |
-2.9/-3.9/-3.2/-3.4 |
O. Otim & G. Amore | ||||||
|
Gsc MASO38 |
-2.9/-2.4 |
-2.2/-2.0 |
G. Amore | |||||
|
Ets1 MASO |
-2.56,-2.22/-2.77/-3.33/-1.81/-1.57/-2.36 |
-3.7/-2.0/-2.32,-3.62/NS/NS/-2.14/-3.92/-2.85 |
P. Oliveri, Q. Tu & J. Yun | |||||
|
Soxb1 MOE26 |
-2.2,-4.2/-1.8 |
L. Chen | ||||||
|
Soxb1-En |
-5.0,-3.6 |
L. Vega & W. Chiu | ||||||
|
Alx1 MOE |
NS,NS/+1.69 |
NS,-2.13/NS |
||||||
|
Ets1 MASO + Alx1 MOE |
-5.0,-4.66/NS |
-2.42,-3.73/-2.57 |
P. Oliveri | |||||
|
Hex MASO |
-2.99/NS/-2.68 |
NS/NS/-3.91 |
Q. Tu, P. Oliveri & J. Yun | |||||
|
FoxN2/3 MASO |
NS/-2.08/NS |
NS/NS/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
SoxC MASO |
-1.68/NS |
NS/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Tgif MASO |
NS/NS/NS/NS |
-1.64/NS/NS/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Alx1 MASO |
-2.46/NS/NS |
NS/NS/-2.08 |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Erg MASO |
-3.31/-1.66/-5.47/NS/-1.73 |
NS/-1.79/-1.86/NS/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
| foxa |
GataE MASO |
-2.1,-1.6/NS/NS,-1.8/-2.34/NS/NS/-2.35 |
(NS/-1.79/NS/NS[24 h])(NS/-1.57/-2.81/-2.24[27 h])-2.9,NS,-2.0/-3.4,-3.1/-2.6 |
P. Y. Lee, I. Peter & J. Yun | ||||
|
FoxA MASO |
NS/NS/NS/NS |
(NS/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h])+2.3/NS,+1.6/+2.1 |
NS,+1.8 |
NS |
P. Oliveri, I. Peter & J. Yun | |||
|
Cad MOE |
NS,-2.0,NS/-2.2 |
NS,-4.1,-4.6/-2.1 |
-2.6,-5.0,-4.6/-4.9/-1.8 |
A. Ransick, T. Minokawa & C. Livi | ||||
|
Dri MASO2 |
NS/NS/NS |
NS/NS/-2.47/-2.41/NS |
-2.3/-2.0/-2.0/-2.0/-3.0/-2.0/-2.0 |
G. Amore, Q. Tu, P. Oliveri & J. Yun | ||||
|
GataC MASO |
-2.7 |
P. Oliveri & J. Rast | ||||||
|
DnN MOE3 |
-2.5/NS |
C. Calestani | ||||||
|
Elk-En4 |
-3.0,-3.7,-4.7 |
M. Arnone | ||||||
|
Gsc MASO2 |
NS/NS |
-3.2/NS/-3.0/-3.0/-3.8/-3.0 |
G. Amore | |||||
|
Otx-En |
NS/NS/-2.8 |
-3.3/NS/-4.1/-2.8 |
A. Ransick & T. Minokawa | |||||
|
Hox11/13b MASO |
NS/-2.4/-1.64 |
(-2.64/-2.53/-1.92[24 h])(-1.88/NS/-2.48[27 h])+1.6/+1.6 |
NS |
C. Arenas-Mena & I. Peter | ||||
|
Soxb1 MOE26 |
NS,-5.1 |
-5.0,-5.4 |
L. Chen | |||||
|
Brn1/2/4 MASO |
-4.4/NS/-3.7 |
C. Yuh | ||||||
|
Ets1 MASO49 |
NS/-1.81/NS/-2.86 |
-1.78/-1.76/-1.88/-5.36 |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Tgif MASO |
-2.64/-2.63/NS/NS/NS/NS |
(-4.1/-2.72/NS/-1.95/NS/NS[24 h])(NS/NS/NS/NS[27 h]) |
Q. Tu, P. Oliveri, J. Yun & I. Peter | |||||
|
Erg MASO49 |
-2.47/-1.75/-2.02/NS/-2.95 |
-2.28/-3.62/-2.59/-2.29/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Dac MASO |
NS/NS/NS/NS |
(-3.13/NS/NS/-2.14[24 h])(NS/NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Myc MASO |
NS/NS/NS/NS |
(NS/-2.2/NS/NS[24 h])(NS/NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Bra MASO |
-1.75/NS/NS/NS |
(NS/-2.61/-1.69/-1.48[24 h])(NS/-1.48/NS/-2.11[27 h]) |
I. Peter & J. Yun | |||||
|
Blimp1b MASO |
NS/-2.39/NS/NS/NS |
(-1.5/NS/NS/NS/-2.67[24 h])(-3.28/NS/-1.49/-1.9/-1.94[27 h]) |
I. Peter & J. Yun | |||||
|
Krl MASO |
NS/-2.29/NS/NS |
(-2.03/-1.67/NS/NS[24 h])(NS/-1.67/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Eve MASO |
NS |
NS/NS/+1.78 |
(NS/NS/NS[24 h])(NS/NS/NS[27 h]) |
I. Peter | ||||
|
OtxHD MASO |
-1.62/NS/NS |
(-2.29/NS/NS[24 h])(NS/-2.24/NS[27 h]) |
I. Peter | |||||
| foxb |
Blimp1b-En27 |
-5.0 |
-5.7 |
C. Livi | ||||
|
GataE MASO |
-2.8/-2.4/-3.4,-2.4/NS,+3.7/NS/NS/NS |
(NS/NS/NS[24 h])(NS/NS/+1.75[27 h])-6.4,-4.4/-4.8,-5.2 |
P. Y. Lee, I. Peter & J. Yun | |||||
|
FoxA MASO |
NS/NS |
(NS/NS[24 h])(NS/NS[27 h])NS,+1.9 |
P. Oliveri, I. Peter & J. Yun | |||||
|
Cad MOE17 |
NS |
-5.1/-3.3/-3.8 |
A. Ransick, T. Minokawa & C. Livi | |||||
|
GataC MASO |
-1.928 |
P. Oliveri & J. Rast | ||||||
|
Otx-En12 |
-6.4 |
T. Minokawa | ||||||
|
Eve MASO |
NS |
NS/NS |
(NS/NS/NS[24 h])(NS/NS/NS[27 h])-5.3 |
A. Ransick & I. Peter | ||||
|
FoxB MASO |
+3.2/+4.1 |
T. Minokawa | ||||||
|
Pmar1 MOE |
+5.7 |
T. Minokawa | ||||||
|
Pmar1-En |
+4.9 |
T. Minokawa | ||||||
|
Alx1 MASO |
-3.2,-2.0/-3.2/NS/NS/NS |
-5.1,-4.7/-3.6/-1.97/-2.33/-4.83 |
P. Oliveri, Q. Tu & J. Yun | |||||
|
Ets1 MASO |
NS/NS/NS/NS |
-11.5,-10.9/-4.2/-3.97,-4.71/-9.81/-3.1/-2.24/-4.07/-6.87/-4.75 |
P. Oliveri, Q. Tu & J. Yun | |||||
|
Tbr MASO33 |
-5.3/-2.6/NS/NS/NS |
-4.9,-5.0/-2.7/-3.64/-2.59/-3.95 |
P. Oliveri, Q. Tu & J. Yun | |||||
|
Soxb1 MOE26 |
-2.4,-2.3 |
-3.2,-3.4 |
L. Chen | |||||
|
Alx1 MOE |
-1.95,-2.68/NS/NS |
P. Oliveri | ||||||
|
Ets1 MASO + Alx1 MOE47 |
-2.88,-3.62/-7.5/-4.03 |
P. Oliveri | ||||||
|
Dri MASO |
NS/NS/NS |
-2.57/-2.86/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Hex MASO |
NS/NS/NS |
NS/-7.74/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Tgif MASO |
NS/NS/NS/NS/NS/NS/NS |
(NS/-2.82/-2.17/NS/-1.84/NS/NS[24 h])(NS/NS/NS/NS[27 h]) |
Q. Tu, P. Oliveri, J. Yun & I. Peter | |||||
|
Erg MASO |
NS/NS/NS/NS/NS |
NS/-4.43/-3.63/NS/+2.48 |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Bra MASO |
NS/NS/NS/NS |
(-2.38/-3.31/-2.1/-2.88[24 h])(-1.41/-3.89/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Myc MASO |
NS/NS/NS/NS |
(NS/-2.02/-1.67/NS[24 h])(NS/NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Krl MASO |
NS/NS/NS/NS |
(-3.7/-1.62/NS/NS[24 h])(NS/NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Dac MASO |
NS/NS/NS/NS |
(NS/-2.84/-2.64/-2.07[24 h])(NS/NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Blimp1b MASO |
NS/NS/NS |
(-4.57/NS/-1.76[24 h])(NS/NS/-3.73[27 h]) |
I. Peter & J. Yun | |||||
|
Hox11/13b MASO |
NS/-2.76/-1.73 |
(NS/NS/-2.19[24 h])(NS/NS/NS[27 h]) |
I. Peter | |||||
|
OtxHD MASO |
-2.96/-2.85/NS |
(NS/NS/NS[24 h])(NS/NS/NS[27 h]) |
I. Peter | |||||
| foxG |
Dac MASO |
NS/NS/-1.65 |
(-1.61/NS/NS[24 h])(NS/NS/NS[27 h]) |
I. Peter & J. Yun | ||||
|
Tgif MASO |
NS/NS/NS |
(NS/NS/-1.84[24 h])(NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Bra MASO |
NS/NS/NS |
(-2.13/NS/-2.13[24 h])(-2.04/NS/-3.43[27 h]) |
I. Peter & J. Yun | |||||
|
Hox11/13b MASO |
NS/NS/NS |
(NS/NS/-1.8[24 h])(NS/NS/NS[27 h]) |
I. Peter | |||||
|
OtxHD MASO |
NS/-2.92/NS |
(-2.7/NS/-2.46[24 h])(NS/-1.3/-2.08[27 h]) |
I. Peter | |||||
| foxN2/3 |
Ets1 MASO |
-1.78/NS/NS/NS |
NS/NS/NS/NS |
Q. Tu, P. Oliveri & J. Yun | ||||
|
Hex MASO |
NS/NS/NS |
-1.82/NS/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Tgif MASO |
NS/NS/NS/NS/NS/NS/NS/NS |
(-1.74/NS/NS/-1.88/NS/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h]) |
Q. Tu, P. Oliveri, J. Yun & I. Peter | |||||
|
Blimp1b MASO |
NS/NS/NS/NS/NS |
(-2.09/NS/-1.71/NS/NS[24 h])(NS/-2.95/NS/-1.42/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Otxa MASO |
NS/+2.04/NS |
(NS/NS/NS[24 h])(NS/NS/NS[27 h]) |
I. Peter | |||||
|
Hox11/13b MASO |
NS/NS/NS |
(NS/NS/-2.01[24 h])(-1.62/NS/-1.75[27 h]) |
I. Peter | |||||
|
Eve MASO |
NS/NS |
NS/NS/NS |
(NS/NS/-1.91[24 h])(NS/-1.94/NS[27 h]) |
I. Peter | ||||
| foxO |
Hex MASO |
NS/NS |
-1.91/-3.31 |
Q. Tu, P. Oliveri & J. Yun | ||||
|
Ets1 MASO |
NS/NS/NS/-1.81 |
NS/NS/-1.87/-1.92 |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Tgif MASO |
NS/NS/NS/NS |
NS/-2.04/-2.5/-1.94 |
Q. Tu, P. Oliveri & J. Yun | |||||
|
FoxN2/3 MASO |
NS/NS/NS |
NS/-1.71/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Dri MASO |
NS/NS/NS |
-1.89/NS/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Erg MASO |
NS/-1.94/NS/-1.84/-3.59 |
NS/-3.62/-2.95/-2.32/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
| foxP |
Tgif MASO |
NS/NS/NS/NS |
(NS/-1.98/NS/NS[24 h])(NS/NS/NS/-2.23[27 h]) |
I. Peter & J. Yun | ||||
|
Blimp1b MASO |
NS/NS/NS/NS/NS |
(NS/NS/NS/-1.89/NS[24 h])(-2.04/NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Dac MASO |
-1.69/NS/NS/NS |
(NS/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Bra MASO |
-2.45/-1.6/NS/-1.41 |
(NS/-2.39/NS/NS[24 h])(NS/-2.49/NS/-1.71[27 h]) |
I. Peter & J. Yun | |||||
|
GataE MASO |
NS/NS/NS/NS |
(NS/NS/-1.64/NS[24 h])(-1.74/NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Hox11/13b MASO |
NS/NS/NS |
(NS/NS/NS[24 h])(NS/-1.75/NS[27 h]) |
I. Peter | |||||
|
Eve MASO |
NS/NS |
NS/NS/NS |
(NS/NS/NS[24 h])(-1.81/NS/NS[27 h]) |
I. Peter | ||||
| fvmo134 |
DnN MOE7 |
-1.6 |
-4.2/-3.5/-2.5/-2.6 |
C. Calestani | ||||
|
Gcm MASO |
-4.2 |
A. Ransick | ||||||
|
N MASO |
-2.2 |
-1.7 (29 h) |
-3.6 |
C. Calestani | ||||
|
GataE MASO |
-3.5/-1.9,-2.1 |
P. Y. Lee | ||||||
| fvmo234 |
DnN MOE |
NS |
-2.5/-2.5 |
C. Calestani | ||||
|
N MASO |
-1.9 |
-1.8 (29 h) |
-2.6 |
C. Calestani | ||||
| fvmo334 |
DnN MOE |
-2.6 |
-2.2/-3.2 |
C. Calestani | ||||
|
N MASO |
-2.4 |
-2.0 (29 h) |
-3.1 |
C. Calestani | ||||
| G-cadherin48 |
Pmar1 MOE |
-3.45,NS/-3.48 |
S. Wu & D. McClay | |||||
|
Pmar1 MOE + Snail MASO |
NS,NS/NS |
S. Wu & D. McClay | ||||||
| gatac |
Cad MOE31 |
-2.4/NS |
-6.4/-3.6/-4.9 |
A. Ransick, T. Minokawa & C. Livi | ||||
|
Elk-En |
-6.0,-5.2,-5.7 |
M. Arnone | ||||||
|
Otx-En21 |
-2.1/-3.3 |
A. Ransick & T. Minokawa | ||||||
|
GataE MASO14 |
NS/NS/NS/NS/NS/NS/NS/NS/NS |
(+1.69/NS/NS/NS[24 h])(NS/+2.17/+2.74/+2.2[27 h])-2.2,-2.5/NS,NS/-2.4,-2.5 |
P. Y. Lee, I. Peter & J. Yun | |||||
|
Dri MASO49 |
-2.1/-2.3/NS/NS |
-2.87/-2.88/-2.43 |
NS/NS |
G. Amore, Q. Tu, P. Oliveri & J. Yun | ||||
|
N MASO30 |
(NS/NS/NS[18 h])(-2.77[21 h])-2.6 |
(-2.77/-2.34/-3.17/-2.91/-5.4[24 h])(-2.37/-4.69/-2.87/-4.11/-2.67[27 h]) |
NS (29 h) |
NS |
C. Calestani, Pei-yun Lee, I. Peter & J. Yun | |||
|
GataC MASO |
+3.1,+3.7/NS |
P. Oliveri | ||||||
|
Hnf6 MASO |
-2.5/-3.0/-2.8/-6.2/-3.1/-3.4 |
+2.0/+3.0 |
G. Amore & O. Otim | |||||
|
Gcm MASO32 |
-2.2 |
-2.5 |
A. Ransick | |||||
|
Soxb1 MOE26 |
-2.9,-2.9 |
L. Chen | ||||||
|
Gsc MASO37 |
-3.6/-2.9 |
G. Amore | ||||||
|
MutantSu(H) MOE |
NS |
-2.7 |
NS |
Pei-yun Lee | ||||
|
FoxA MASO |
NS/NS/NS/NS/NS |
(NS/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h])NS/+2.2 |
NS/NS |
P. Oliveri, I. Peter & J. Yun | ||||
|
Ets1 MASO |
NS/NS/NS/NS |
NS/-1.81/NS/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Hex MASO |
NS/NS |
NS/-2.91 |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Erg MASO |
NS/NS/NS/NS/NS |
NS/-3.08/-2.96/NS/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Blimp1b MASO |
NS/NS/NS/NS/NS |
(NS/-1.78/-2.47/NS/-1.83[24 h])(NS/NS/NS/-2.27/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Bra MASO |
NS/NS/NS/NS |
(NS/NS/NS/NS[24 h])(+1.87/NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Hox11/13b MASO |
NS/-3.63/-2.27 |
(NS/NS/-1.89[24 h])(NS/NS/-2.04[27 h]) |
I. Peter | |||||
|
OtxHD MASO |
-4.09/-3.73/NS |
(NS/NS/NS[24 h])(NS/NS/NS[27 h]) |
I. Peter | |||||
| gatae |
Cad MOE |
NS/NS |
-5.1/-3.1 |
-4.7/-3.6/-3.1 |
A. Ransick, T. Minokawa & C. Livi | |||
|
DnN MOE |
-2.4/NS |
C. Calestani | ||||||
|
Otx-En |
-3.3,-2.2/-2.8,-3.0/-3.2 |
NS/NS,-2.4/-2.4/-4.1/-2.4 |
A. Ransick & T. Minokawa | |||||
|
Soxb1 MOE26 |
-1.6,-3.8 |
-4.1,-4.2 |
J. Rast & K. Young | |||||
|
Soxb1-En |
-6.0,-3.5 |
L. Vega & W. Chiu | ||||||
|
FoxA MASO |
NS/NS/NS/NS |
(NS/NS/NS[24 h])(NS/NS/NS[27 h])NS/NS |
-2.8,-1.6/-2.5/-8.5 |
P. Oliveri, I. Peter & J. Yun | ||||
|
Hnf6 MASO |
NS/NS/NS/NS/NS |
-2.1/-2.6/-2.7/NS/NS |
G. Amore & O. Otim | |||||
|
Eve MASO |
NS/NS |
NS/NS/NS |
(NS/NS/-2.72[24 h])(-2.3/-2.41/-1.98[27 h])-2.6 |
A. Ransick & I. Peter | ||||
|
Hox11/13b MASO |
-1.74/NS/NS |
(-1.63/NS/-2.62[24 h])(-1.7/-2.16/-1.7[27 h])+2.4/+1.7 |
NS |
C. Arenas-Mena & I. Peter | ||||
|
N MASO |
(NS/NS/NS[18 h])(NS[21 h]) |
(NS/NS/NS/NS/NS[24 h])(NS/NS/NS/NS/NS[27 h]) |
-2.84 (37 h) |
Pei-yun Lee, I. Peter & J. Yun | ||||
|
MutantSu(H) MOE |
-2.2/NS/-1.68/NS/NS/-2.52 |
NS/NS/NS/-1.88/NS/NS |
NS/NS/NS/NS/NS/NS |
Pei-yun Lee | ||||
|
Dac MASO |
NS/-1.51/NS/-2.73 |
(NS/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Tgif MASO |
NS/NS/NS/NS |
(NS/NS/NS/NS[24 h])(NS/NS/NS/-1.63[27 h]) |
I. Peter & J. Yun | |||||
|
Bra MASO |
-3.29/-3.11/NS/-2.02 |
(NS/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Blimp1b MASO |
-2.2/NS/NS/NS |
(NS/NS/NS/NS[24 h])(-1.8/NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
| gcm |
Cad MOE |
-6.3,-5.1,-5.2/-3.3 |
-5.2,-6.1,-4.6/-4.3 |
-5.0,-5.7/-5.5 |
A. Ransick & T. Minokawa | |||
|
DnN MOE |
-3.5/-2.1,-3.1 |
C. Calestani | ||||||
|
Gcm MASO |
-1.9 |
-2.0/-3.5 |
A. Ransick | |||||
|
Elk-En |
-4.3,-3.0,-6.4 |
M. Arnone | ||||||
|
N MASO |
(-5.36/-5.03/-4.29[18 h])(-3.68[21 h])-2.4 |
(-3.69/-4.28/-5.75/-4.61/-5.39[24 h])(-4.09/-4.43/-3.86/-4.74/-6.32[27 h]) |
-2.6/-2.3 (29 h)/-4.93 (37 h) |
-2.4 |
C. Calestani, Pei-yun Lee, I. Peter & J. Yun | |||
|
FoxA MASO |
NS/NS/NS/NS/NS |
(NS/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h])NS,NS/+3.2/NS |
+2.2,+1.6/+3.2,+3.0 |
NS/NS |
P. Oliveri, I. Peter & J. Yun | |||
|
Soxb1 MOE26 |
NS |
-3.5,-5.1 |
-4.1,-3.2 |
L. Chen | ||||
|
Hnf6 MASO |
+2.2/NS |
G. Amore & O. Otim | ||||||
|
MutantSu(H) MOE |
-2.6/-4.0 |
-3.3/--- |
-3.4/-4.0 |
Pei-yun Lee | ||||
|
Tgif MASO |
NS/NS/NS/NS/NS/NS/NS/NS |
(NS/NS/NS/-1.72/NS/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h]) |
Q. Tu, P. Oliveri, J. Yun & I. Peter | |||||
|
Blimp1b MASO |
NS/-3.2/NS/NS/NS |
(NS/-1.6/NS/NS/-3.93[24 h])(NS/NS/NS/-1.86/-3.73[27 h]) |
I. Peter & J. Yun | |||||
|
Hox11/13b MASO |
NS/NS/NS |
(NS/NS/-3.9[24 h])(NS/NS/-2.05[27 h]) |
I. Peter | |||||
|
Eve MASO |
NS/-3.65 |
NS/NS |
(NS/NS/NS[24 h])(-2.23/NS/NS[27 h]) |
I. Peter | ||||
| gsc |
Dri MASO |
-5.0/-7.0 |
-7.0/-8.6/-4.0/-2.9/NS/-1.88/-1.7 |
-3.23/-3.96/-2.15 |
-2.6/-4.5 |
G. Amore, Q. Tu, P. Oliveri & J. Yun | ||
|
Dri-En |
-3.6/-2.7 |
G. Amore | ||||||
|
Alx1 MASO |
-3.6,-2.5/NS/NS/NS/NS/NS |
NS/NS/NS/NS/NS |
P. Oliveri, Q. Tu & J. Yun | |||||
|
Soxb1 MOE26 |
-4.0,-9.1 |
-6.7,-4.8 |
L. Chen | |||||
|
Soxb1-En |
-3.3,-1.9 |
L. Vega & W. Chiu | ||||||
|
Pmar1 MOE |
-13.3 |
P. Oliveri & L. Vega | ||||||
|
Cad MOE |
-6.5 |
P. Oliveri & L. Vega | ||||||
|
Pmar1-En |
-6.6 |
P. Oliveri & L. Vega | ||||||
|
Hnf6 MASO |
-6.1/-4.9/-6.0 |
G. Amore & O. Otim | ||||||
|
GataE MASO45 |
-5.0,-4.8/-4.0,-4.1 |
P. Y. Lee | ||||||
|
Tel MASO |
NS/NS/-1.95 |
NS/NS/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
FoxN2/3 MASO |
NS/NS/NS |
NS/-2.15/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Tbr MASO |
-1.64/NS |
NS/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
SoxC MASO |
-9.71/NS |
NS/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Tgif MASO49 |
NS/NS/-2.88/NS |
-3.0/-2.79/-3.19/-3.25 |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Ets1 MASO49 |
NS/NS/-2.71/-2.02 |
-2.48/-3.1/NS/-8.93 |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Erg MASO49 |
-2.68/NS/-2.78/-2.01/-2.46 |
NS/-2.98/-2.41/-1.76/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
| hex |
Ets1 MASO |
-4.02/-5.21/-2.61/-3.8 |
NS/-1.86/-3.39/-1.99 |
Q. Tu, P. Oliveri & J. Yun | ||||
|
Tgif MASO |
NS/NS/-1.86 |
NS/-1.88/-2.19 |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Dri MASO |
NS/NS/NS |
-1.77/NS/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Hex MASO |
-1.65/-2.1 |
NS/-3.85 |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Erg MASO |
-1.63/NS/-4.19/-1.71/NS |
NS/NS/NS/NS/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
| hh |
FoxA MASO |
NS/NS/NS/NS |
(NS/NS/NS/NS[24 h])(-4.52/-8.1/-6.0/-3.09[27 h]) |
-2.5/-2.3 |
-3.3/-2.7 |
P. Oliveri, I. Peter & J. Yun | ||
|
Tgif MASO |
NS/NS/NS/NS |
(NS/NS/NS/NS[24 h])(NS/-1.72/-2.15/-2.01[27 h]) |
I. Peter & J. Yun | |||||
|
Blimp1b MASO |
NS/NS/NS/NS/NS |
(NS/NS/NS/NS/NS[24 h])(-4.7/NS/-3.0/-1.45/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Krl MASO |
NS/NS/NS/NS |
(NS/NS/NS/NS[24 h])(-2.06/-8.5/NS/-1.67[27 h]) |
I. Peter & J. Yun | |||||
|
GataE MASO |
NS/NS/NS/NS |
(NS/NS/NS/NS[24 h])(-3.8/-2.19/-5.02/-3.54[27 h]) |
I. Peter & J. Yun | |||||
|
Dac MASO |
NS/NS/NS/NS |
(NS/NS/NS/NS[24 h])(NS/-5.76/-1.87/-3.21[27 h]) |
I. Peter & J. Yun | |||||
|
Myc MASO |
NS/NS/NS/NS |
(NS/NS/NS/NS[24 h])(-2.53/NS/NS/-2.67[27 h]) |
I. Peter & J. Yun | |||||
|
Bra MASO |
NS/NS/NS/NS |
(NS/NS/NS/NS[24 h])(NS/-2.2/-3.44/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Hox11/13b MASO |
NS/NS/NS |
(NS/NS/NS[24 h])(-3.74/-2.91/NS[27 h]) |
I. Peter | |||||
|
Otxa MASO |
NS/NS |
(NS/-1.67[24 h])(NS/NS/NS[27 h]) |
I. Peter | |||||
|
Eve MASO |
NS |
NS/NS |
(NS/-1.96[24 h])(NS/-3.25/NS[27 h]) |
I. Peter | ||||
|
OtxHD MASO |
NS/NS/NS |
(NS/NS/NS[24 h])(NS/-3.53/-3.75[27 h]) |
I. Peter | |||||
| hnf1 |
GataE MASO |
-2.03/-2.48/NS/-3.74 |
(NS/NS/-3.47/-2.29[24 h])(-3.48/NS/-3.44/NS[27 h]) |
I. Peter & J. Yun | ||||
|
Bra MASO |
NS/-3.42/NS/-2.74 |
(-2.1/-2.5/-1.54/-2.37[24 h])(-3.7/-1.85/-2.08/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Krl MASO |
NS/NS/NS/-1.97 |
(NS/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Tgif MASO |
-2.11/NS/NS/-2.26 |
(NS/NS/NS/-1.65[24 h])(NS/NS/NS/-2.09[27 h]) |
I. Peter & J. Yun | |||||
|
Myc MASO |
NS/NS/-2.34/-2.89 |
(-1.41/NS/-2.92/NS[24 h])(-2.21/NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
N MASO |
+1.69/NS/NS |
(+2.63/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Dac MASO |
-2.5/NS/-3.28/NS |
(NS/NS/-2.5/NS[24 h])(NS/NS/-1.91/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Blimp1b MASO |
-3.86/-2.11/NS/NS/NS |
(NS/-1.95/-1.5/NS/NS[24 h])(-1.81/-2.74/NS/-1.63/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Otxa MASO |
-3.68/NS/-3.4 |
(NS/NS/NS[24 h])(NS/NS/NS[27 h]) |
I. Peter | |||||
|
Hox11/13b MASO |
NS/NS/NS |
(-1.63/NS/-2.43[24 h])(-2.28/-1.97/-1.72[27 h]) |
I. Peter | |||||
|
Eve MASO |
NS/NS |
-2.98/-3.81/NS |
(-2.44/-1.96/-3.34[24 h])(-3.19/-3.05/-2.26[27 h]) |
I. Peter | ||||
|
OtxHD MASO |
NS/-2.25/NS |
(NS/NS/NS[24 h])(NS/NS/NS[27 h]) |
I. Peter | |||||
|
Hnf1 MASO |
(NS/NS/NS[24 h])(NS/+1.45/+1.93[27 h]) |
I. Peter | ||||||
| hnf6 |
Tbr MASO |
NS/NS |
NS,+1.9/NS/NS |
P. Oliveri, K. Young, Q. Tu & J. Yun | ||||
|
Tgif MASO49 |
NS/NS/NS/NS/NS |
(NS/-2.67/-2.19/-1.95/NS[24 h])(NS/-1.7[27 h]) |
Q. Tu, P. Oliveri, J. Yun & I. Peter | |||||
|
Ets1 MASO |
NS/NS/NS/NS |
NS/NS/-2.09/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Hex MASO |
NS/NS |
-1.85/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Erg MASO |
NS/NS/NS/-3.46/-1.66 |
NS/-1.81/-1.76/-1.93/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Dac MASO |
+1.68/NS |
(NS/NS[24 h])(NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Bra MASO |
NS/-2.22 |
(NS/NS[24 h])(NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Otxa MASO |
+2.4/NS |
(NS/NS/NS[24 h])(NS/NS/NS[27 h]) |
I. Peter | |||||
|
Eve MASO |
NS |
NS/+1.6 |
(NS/NS/-1.87[24 h])(-2.93/-2.5/NS[27 h]) |
I. Peter | ||||
|
Hnf1 MASO |
(NS/NS/NS[24 h])(NS/NS/+1.61[27 h]) |
I. Peter | ||||||
| hox11/13b |
Blimp1b-En |
-7.6 |
-6.2 |
-3.2 |
C. Livi | |||
|
Cad MOE |
-5.4 |
-5.6/-2.7 |
-5.2/-3.1 |
A. Ransick & T. Minokawa | ||||
|
Otx-En |
-4.8/-4.3/-6.5 |
-3.0/-4.3/-6.6/-8.8 |
A. Ransick & T. Minokawa | |||||
|
Soxb1 MOE26 |
-2.4,-2.3 |
-1.8,NS |
NS,NS/NS |
L. Chen | ||||
|
Eve MASO |
NS/NS/NS |
-1.8/-1.8/NS/NS/NS |
(-1.89/-1.62/-2.48[24 h])(-1.95/-2.0/-2.04[27 h])-2.8/-2.1 |
A. Ransick, C. Livi & I. Peter | ||||
|
GataE MASO |
NS/NS/NS |
(+1.79/NS/NS[24 h])(NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Dac MASO |
NS/NS/NS/NS |
(NS/NS/NS/NS[24 h])(NS/NS/NS/+2.17[27 h]) |
I. Peter & J. Yun | |||||
|
N MASO |
NS/+1.77/NS |
(NS/-1.77/NS/NS[24 h])(NS/NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Myc MASO |
NS/NS/NS/NS |
(NS/NS/NS/NS[24 h])(+1.62/+1.52/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Bra MASO |
NS/NS/NS/NS |
(NS/NS/NS/NS[24 h])(NS/NS/+1.42/+1.98[27 h]) |
I. Peter & J. Yun | |||||
|
Krl MASO |
NS/NS/NS/NS |
(NS/NS/+1.77/+1.98[24 h])(NS/NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Hox11/13b MASO |
NS/NS/NS |
(+2.31/+2.82/NS[24 h])(+2.38/+2.59/+1.22[27 h]) |
I. Peter | |||||
| hsp70 |
Hox11/13b MASO |
NS/+1.6 |
C. Arenas-Mena | |||||
| jun |
Dri MASO |
NS/+1.66/NS |
NS/NS/NS |
Q. Tu, P. Oliveri & J. Yun | ||||
|
Erg MASO |
NS/NS/NS/-5.32/NS |
NS/NS/NS/NS/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
| krl |
Cad MOE |
-9.9,-10.8 |
-4.9 |
P. Oliveri & K. Young | ||||
|
Pmar1 MOE |
NS,NS |
-2.1,-2.5 |
P. Oliveri & K. Young | |||||
|
Pmar1-En |
NS,NS |
NS,NS |
P. Oliveri & K. Young | |||||
|
Pmar1 MOE + Cad MOE |
-6.3,-7.4 |
-2.5 |
P. Oliveri & K. Young | |||||
|
Pmar1-En + Cad MOE |
-6.1,-5.2 |
NS |
P. Oliveri & K. Young | |||||
|
Hnf6 MASO |
NS/-2.1/NS/-1.9/NS |
+2.9/+3.5/+2.0/+3.4/+5.2 |
G. Amore & O. Otim | |||||
|
Soxb1 MOE26 |
-2.9,-2.9 |
-3.8,-4.0 |
-3.3,-3.1/NS |
L. Chen | ||||
|
Tbr MASO |
NS/NS |
+2.66/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Dri MASO |
NS/NS/NS |
NS/+1.97/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Tgif MASO |
NS/NS/NS/NS/NS/NS/NS |
(+2.54/NS/NS/NS/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h]) |
Q. Tu, P. Oliveri, J. Yun & I. Peter | |||||
|
Alx1 MASO |
NS/NS/NS |
+2.21/+1.81/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Erg MASO |
NS/NS/NS/NS/NS |
+2.41/NS/NS/NS/+2.36 |
Q. Tu, P. Oliveri & J. Yun | |||||
|
GataE MASO |
NS/NS/NS/NS |
(NS/+2.46/+2.85/+1.68[24 h])(+4.58/+2.82/+2.9/+1.43[27 h]) |
I. Peter & J. Yun | |||||
|
Blimp1b MASO |
NS/-1.65/NS/NS/NS |
(NS/NS/NS/NS/+2.01[24 h])(+1.82/+2.64/+1.6/+2.0/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Dac MASO |
NS/NS/NS/NS |
(NS/NS/NS/NS[24 h])(NS/+1.48/+2.97/+1.79[27 h]) |
I. Peter & J. Yun | |||||
|
Bra MASO |
NS/NS/NS/NS |
(NS/NS/+1.94/NS[24 h])(NS/+1.82/+3.03/+3.01[27 h]) |
I. Peter & J. Yun | |||||
|
Myc MASO |
NS/NS/NS/NS |
(NS/NS/NS/NS[24 h])(NS/+2.03/NS/+2.46[27 h]) |
I. Peter & J. Yun | |||||
|
N MASO |
NS/NS/NS |
(-2.51/-1.65/NS/NS[24 h])(NS/NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
FoxA MASO |
NS/NS/NS/NS |
(NS/+1.6/NS/NS[24 h])(+2.15/+1.56/+1.94/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Eve MASO |
NS/NS |
NS/NS/NS |
(NS/NS/NS[24 h])(-1.77/NS/NS[27 h]) |
I. Peter | ||||
|
Hox11/13b MASO |
NS/NS/NS |
(-1.71/NS/-1.79[24 h])(NS/NS/-1.64[27 h]) |
I. Peter | |||||
|
Otxa MASO |
NS/NS/NS |
(NS/+1.77/NS[24 h])(NS/NS/+2.54[27 h]) |
I. Peter | |||||
| lim1 |
GataE MASO |
-1.6/-2.3,-1.9/NS,NS/NS,NS |
-2.6,-2.2/-2.3,-2.3 |
P. Y. Lee | ||||
|
Cad MOE |
NS |
-2.5/NS |
-5.0/NS |
A. Ransick & T. Minokawa | ||||
|
Elk-En6 |
-6.3,-3.7,-6.5 |
M. Arnone | ||||||
|
Soxb1 MASO26 |
-2.9 |
-2.3 |
NS |
C. Livi | ||||
|
Otx-En |
-2.5/NS |
-3.3/-5.4 |
A. Ransick & T. Minokawa | |||||
| msp130 |
Dri MASO |
-3.6/-5.1/-2.1/-2.4/-2.0/-2.5/-3.0/NS/-1.95/NS |
NS/NS/NS |
G. Amore, Q. Tu, P. Oliveri & J. Yun | ||||
|
Cad MOE19 |
-5.3 |
C. Livi | ||||||
|
Dri-En |
-3.6/-1.9 |
G. Amore | ||||||
|
Pmar1 MASO |
+3.1 |
+6.4 |
P. Oliveri | |||||
|
Pmar1-En |
+1.6 |
+4.7 |
P. Oliveri | |||||
|
Krl MASO26 |
-2.423,-2.123/-4.8,-3.3/-4.9,-2.8 |
-2.2/-1.7,-2.7/NS |
-1.9,-2.7/NS |
J. Rast & K. Young | ||||
|
Hnf6 MASO |
-2.8/-2.2/-2.7/-3.0/-3.4/NS/-1.8 |
NS/NS |
O. Otim & G. Amore | |||||
|
FoxB MASO |
-1.7 |
-2.0 |
T. Minokawa | |||||
|
Ets1 MASO |
-3.3/-4.3/NS/-5.63/-8.84/-5.66/-3.42/-6.02 |
-4.3/-5.05/-2.48/-5.42/-4.58/-6.4/-4.81 |
P. Oliveri, L. Vega, Q. Tu & J. Yun | |||||
|
Alx1 MASO43 |
-2.9,-3.1/-2.4/NS/-3.73/-2.41/-4.09 |
-1.8/-2.1/-3.07/-2.33/-4.49 |
P. Oliveri, L. Vega, Q. Tu & J. Yun | |||||
|
Gsc MASO38 |
-3.2,NS |
-2.2/-3.7 |
G. Amore | |||||
|
Soxb1 MOE26 |
-8.4,-8.9/-2.8,-1.6 |
L. Chen | ||||||
|
Alx1 MOE |
NS/NS |
NS/NS |
P. Oliveri | |||||
|
Ets1 MASO + Alx1 MOE47 |
NS/-3.91 |
-3.23/-4.54 |
P. Oliveri | |||||
|
Hex MASO |
-4.08/-1.57/-3.33 |
-2.0/NS/-4.88 |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Tgif MASO |
-2.87/-1.84/-2.62 |
NS/-2.92/-2.57 |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Tbr MASO |
NS/NS |
-1.73/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
SoxC MASO |
-2.02/NS |
NS/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Erg MASO |
-4.86/-2.0/-6.21/-3.07/-2.52 |
NS/-3.25/-2.79/-1.61/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
| msp130-like |
Bra MASO1 |
-4.3 |
J. Rast | |||||
|
Pmar1 MOE |
+3.2 |
+5.8 |
P. Oliveri | |||||
|
Pmar1-En |
+2.4 |
+4.9 |
P. Oliveri | |||||
|
Alx1 MASO |
-4.7/-3.1/-3.5/NS |
NS/NS |
P. Oliveri | |||||
|
Ets1 MASO |
-2.3/-5.58,-5.29/-2.08 |
-2.8/-5.42,-5.6/-13.23/-3.47 |
P. Oliveri | |||||
|
Alx1 MOE |
-2.29,-1.99/NS |
-2.38,-2.55/NS/NS |
P. Oliveri | |||||
|
Ets1 MASO + Alx1 MOE47 |
-6.35,-6.06/-2.52 |
-5.72,-5.89/-5.77/-3.99 |
P. Oliveri | |||||
|
Hex MASO |
-3.05/-1.67 |
NS/-4.14 |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Ets1 MASO |
-8.56/-8.38/-3.29/-6.36 |
-6.39/-5.15/-7.49/-7.91 |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Alx1 MASO |
-4.4/-2.83/-3.95 |
-2.83/-2.11/-4.65 |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Tgif MASO |
-2.06/-1.69/NS/-1.85 |
-1.6/-2.21/-2.07/-1.72 |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Erg MASO |
-2.07/NS/-2.6/-2.06/-2.2 |
NS/-1.61/NS/NS/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
| msx |
GataE MASO |
NS/NS/NS/NS |
(NS/NS/-3.51/-2.45[24 h])(-3.32/NS/-3.69/NS[27 h]) |
I. Peter & J. Yun | ||||
|
Dac MASO |
NS/NS/NS/NS |
(-3.09/NS/-3.21/-1.69[24 h])(NS/NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
N MASO |
NS/NS/NS |
(+3.12/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Bra MASO |
NS/NS/NS/NS |
(-1.53/-3.04/-1.79/NS[24 h])(NS/-2.0/NS/-1.62[27 h]) |
I. Peter & J. Yun | |||||
|
Myc MASO |
NS/NS/NS/NS |
(NS/-1.95/NS/NS[24 h])(NS/NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Otxa MASO |
-1.94 |
(NS[24 h])(NS[27 h]) |
I. Peter | |||||
| myc |
Myc MASO |
+1.6/NS/+1.95/NS |
(+1.56/+1.52/NS/+1.71[24 h])(NS/+1.71/+2.09/+1.69[27 h]) |
I. Peter & J. Yun | ||||
|
Blimp1b MASO |
NS/NS/NS/NS/NS |
(NS/NS/NS/NS/NS[24 h])(-2.05/NS/NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
GataE MASO |
-1.48/NS/-1.84/NS |
(NS/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Hox11/13b MASO |
NS/NS/NS |
(NS/NS/NS[24 h])(NS/NS/-1.75[27 h]) |
I. Peter | |||||
| not |
GataE MASO |
-1.9,NS/NS/NS,NS |
-2.2,-2.1/-2.4,-2.3 |
P. Y. Lee | ||||
|
Otx-En |
-3.6 |
-5.0 |
-2.1/-3.3 |
A. Ransick & T. Minokawa | ||||
|
GataC MASO |
-1.7/NS |
P. Oliveri & J. Rast | ||||||
|
Tgif MASO49 |
NS/NS/NS |
-3.32/-2.16/-1.97 |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Ets1 MASO |
NS/NS/NS/NS |
NS/NS/-2.87/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Hex MASO |
NS/+1.74 |
NS/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Erg MASO |
NS/NS/NS/NS/NS |
NS/NS/-1.72/NS/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
| notch |
GataE MASO |
NS/NS/NS |
(NS/NS/NS[24 h])(NS/NS/-1.79/-1.53[27 h]) |
I. Peter & J. Yun | ||||
|
N MASO |
+1.87/NS/+1.49 |
(NS/NS/+2.49/NS[24 h])(NS/NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Hox11/13b MASO |
NS/NS/NS |
(NS/NS/NS[24 h])(NS/NS/-1.64[27 h]) |
I. Peter | |||||
|
Otxa MASO |
NS/+1.86/NS |
(NS/NS/NS[24 h])(NS/NS/NS[27 h]) |
I. Peter | |||||
| nrl |
GataE MASO |
+2.3,NS/+1.8,+2.7 |
+2.1,+1.6,NS/+2.3,+1.8 |
P. Y. Lee | ||||
|
Bra MASO1 |
+2.4,+4.3 |
J. Rast | ||||||
|
Otx-En3 |
NS |
+3.5 |
A. Ransick & T. Minokawa | |||||
|
Tbr MASO |
-2.2,-3.4,-3.4,-2.7/-1.8/-2.4/NS/NS/NS |
NS/NS/+2.31/NS/NS |
P. Oliveri, Q. Tu & J. Yun | |||||
|
Alx1 MASO |
-1.8/-2.7/NS/NS |
NS/NS/NS/NS |
P. Oliveri, L. Vega, Q. Tu & J. Yun | |||||
|
Pmar1 MOE |
+2.4 |
+4.5 |
P. Oliveri & L. Vega | |||||
|
Cad MOE |
+3.6 |
+2.6 |
P. Oliveri & L. Vega | |||||
|
Pmar1-En |
+3.4 |
+2.3 |
P. Oliveri & L. Vega | |||||
|
FoxN2/3 MASO |
NS/-2.25/-2.01 |
NS/+1.91/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Tgif MASO |
NS/-1.7/-1.82/+1.78 |
+1.57/+3.92/NS/+3.83 |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Tel MASO |
NS/NS/-2.31 |
+1.75/+1.6/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Ets1 MASO |
NS/+2.13/NS |
+1.77/+3.66/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Hex MASO |
NS/NS/NS |
NS/NS/+2.28 |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Erg MASO |
NS/-2.4/NS/-2.09/-2.54 |
NS/NS/NS/NS/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
| otx3 |
Blimp1b MASO |
-3.8,-3.0 |
-1.8,-2.1,-2.3,-2.3 |
C. Livi | ||||
| otxb1/2 |
Blimp1b MASO |
-2.7,-2.1 |
-2.1,-1.9/NS/NS/-1.73/NS/NS/NS |
(NS/NS/NS/NS/-1.67[24 h])(-2.12/NS/NS/NS/NS[27 h])-2.3/-2.7 |
C. Livi, I. Peter & J. Yun | |||
|
Blimp1b-En |
-5.6 |
-4.6 |
-3.6 |
C. Livi | ||||
|
GataE MASO |
-2.5,-3.1/-3.6,-3.6/-1.86/NS/NS/NS |
(-1.41/-1.74/-1.91/-1.49[24 h])(-1.65/-2.64/NS/-1.72[27 h])-1.8,NS,NS/-3.0,-3.7 |
P. Y. Lee, I. Peter & J. Yun | |||||
|
Cad MOE |
NS |
+10.3/+1.7 |
NS/NS |
A. Ransick & T. Minokawa | ||||
|
Otx-En |
-3.8/-3.7 |
-3.2/-4.1/-3.3 |
-2.1/-2.3/-3.2/-3.8 |
A. Ransick & T. Minokawa | ||||
|
Tgif MASO |
NS/NS/NS/NS |
(NS/NS/-1.9/-1.63[24 h])(NS/-1.49/NS/-1.81[27 h]) |
I. Peter & J. Yun | |||||
|
Dac MASO |
NS/NS/NS/NS |
(-2.13/NS/NS/-2.47[24 h])(-1.92/NS/-1.64/NS[27 h]) |
I. Peter & J. Yun | |||||
|
N MASO |
NS/+2.02/NS |
(NS/+3.55/NS/NS[24 h])(+2.08/NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Bra MASO |
NS/-3.05/-2.41/-1.82 |
(NS/-1.68/NS/NS[24 h])(-1.77/-1.48/NS/-2.07[27 h]) |
I. Peter & J. Yun | |||||
|
Myc MASO |
NS/NS/NS/NS |
(NS/NS/NS/NS[24 h])(-1.63/NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Otxa MASO |
NS/NS/+2.05 |
(NS/NS/NS[24 h])(NS/NS/NS[27 h]) |
I. Peter | |||||
| pks |
GataE MASO |
-2.2/-3.2/-1.9 |
-3.4,-1.6,NS/-3.2,-3.6 |
P. Y. Lee | ||||
|
Bra MASO1 |
-2.6 |
J. Rast | ||||||
|
DnN MOE7 |
-1.8 |
-3.3,-2.5/-2.7,-3.1 |
C. Calestani | |||||
|
Elk-En7 |
-7.1,-5.2,-6.5 |
I. Arone | ||||||
|
Gcm MASO |
-6.1/-7.2 |
-5.2/-3.3/-12.3/-7.8 |
A. Ransick | |||||
|
N MASO |
-2.6 |
-3.4 (29 h) |
-3.1 |
C. Calestani | ||||
|
DnN MOE |
-2.1 (29 h) |
C. Calestani | ||||||
|
Krl MASO |
NS/NS |
-2.1,-1.7 |
L. Chen | |||||
|
FoxA MASO |
+3.7 |
NS/NS |
P. Oliveri | |||||
|
Hex MASO49 |
-3.63/-2.14 |
NS/-4.69 |
Q. Tu, P. Oliveri & J. Yun | |||||
|
FoxN2/3 MASO |
NS/-2.54/NS |
NS/NS/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
SoxC MASO |
-2.61/NS |
NS/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Tgif MASO |
NS/NS/NS/NS |
NS/NS/-1.81/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Erg MASO49 |
-4.86/NS/-7.53/-2.85/-2.29 |
NS/-2.61/-2.18/NS/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
| pm27/sm27 |
Dri MASO |
-3.2/-5.0 |
-4.0/-4.3/-2.3/-2.8 |
G. Amore | ||||
|
Dri-En |
-3.2/-2.3 |
G. Amore | ||||||
|
Pmar1 MOE |
NS |
+4.0 |
P. Oliveri | |||||
|
Pmar1-En |
NS |
+2.7 |
P. Oliveri | |||||
|
Gsc MASO38 |
-2.2/-3.3 |
-2.0/-3.0 |
G. Amore | |||||
|
Hnf6 MASO |
-5.8/-4.0/-3.5/-5.1/-5.3/-2.6/-4.0 |
NS |
G. Amore & O. Otim | |||||
|
Soxb1 MOE26 |
-7.8,-13.2/-2.5 |
L. Chen | ||||||
|
Ets1 MASO |
-4.4/NS/-3.21,-5.18/-6.55 |
P. Oliveri & L. Vega | ||||||
|
Alx1 MOE |
NS,-3.56/NS |
P. Oliveri | ||||||
|
Ets1 MASO + Alx1 MOE47 |
-4.22,-6.18/-3.33 |
P. Oliveri | ||||||
|
Hex MASO |
-2.52/NS/-2.44 |
NS/NS/-4.78 |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Tel MASO |
-2.82/-3.51/NS |
NS/NS/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Ets1 MASO |
-2.53/-3.27/-3.13/-4.36 |
-3.48/-4.74/-7.7/-4.72 |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Alx1 MASO |
-4.02/-1.98/-1.93 |
-1.97/-1.6/-4.22 |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Tgif MASO |
-2.03/-2.37/NS/NS |
-2.53/-1.91/-2.58/-2.24 |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Dri MASO |
-1.66/NS |
-2.32/-2.09/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Erg MASO |
-3.49/-4.64/-8.2/-3.98/-4.08 |
-2.02/-4.53/-3.88/-2.54/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
| pmar1 |
Cad MOE |
-4.0 (6 h)/-3.0 (6 h) |
A. Ransick & T. Minokawa | |||||
|
Otx-En |
-3.1,-2.9/-2.8 |
A. Ransick & T. Minokawa | ||||||
| six1/2 |
Gcm MASO |
-2.07/-1.68/-2.23 |
S. Materna | |||||
| sm30 |
Dri MASO |
-6.2/-5.4/-5.6/-5.6 |
-7.5/-5.0/-6.0 |
G. Amore | ||||
|
Dri-En |
-6.2/-5.4/-5.6/-5.6 |
G. Amore | ||||||
|
Tbr MASO |
-1.8 |
P. Oliveri & L. Vega | ||||||
|
Alx1 MASO |
-2.5 |
P. Oliveri & L. Vega | ||||||
|
Hnf6 MASO35, 40 |
-3.2/NS/-2.1/-5.5/-4.1/-3.2/-4.0 |
-4.5/-6.0/-3.6/-2.7/-4.5 |
G. Amore & O. Otim | |||||
|
Ets1 MASO |
NS/NS |
P. Oliveri | ||||||
|
Alx1 MOE |
+2.57/+2.34 |
P. Oliveri | ||||||
|
Ets1 MASO + Alx1 MOE |
NS/NS |
P. Oliveri | ||||||
| sm50 |
Dri MASO22 |
NS/-3.0/-2.1/-4.8 |
NS/-2.5/-4.0/-4.8/-3.2/-2.2/-2.54/-2.61 |
-2.64/-2.46/NS |
-4.0/-3.0/NS/-2.5 |
+4.0/+3.4 |
G. Amore, Q. Tu, P. Oliveri & J. Yun | |
|
Dri-En22 |
-3.2/-2.3 |
G. Amore | ||||||
|
Bra MASO1 |
-2.2 |
J. Rast | ||||||
|
Pmar1 MOE1 |
+4.4/+2.3 |
P. Oliveri | ||||||
|
Pmar1-En11 |
+2.5/NS |
P. Oliveri | ||||||
|
Eve MASO |
-3.8,-3.5 |
A. Ransick | ||||||
|
Gsc MASO2, 38 |
NS,NS,-1.7 |
-3.2/-2.0 |
NS/-3.0,-3.0 |
G. Amore | ||||
|
Hnf6 MASO |
-2.3/-2.5/-2.8/-3.4/-2.5/-2.4/NS |
NS/NS |
NS |
O. Otim & G. Amore | ||||
|
Krl MASO26 |
-3.0,NS/-5.3,-4.2 |
-3.2/NS,-2.4 |
-4.1,-4.9/-1.7 |
K. Young & J. Rast | ||||
|
Ets1 MASO |
-1.9/-1.9,-2.01/-2.2/-3.04/NS/NS/-1.92/-4.92 |
-6.5/-4.6/-3.44,-5.29/-4.25/-4.98/-4.31/-4.16/-6.79/-3.83 |
P. Oliveri, L. Vega, Q. Tu & J. Yun | |||||
|
Alx1 MASO |
-2.7,NS/NS/-2.88/NS/NS |
-3.4/-2.0/NS/-2.09/NS/-4.51 |
P. Oliveri, L. Vega, Q. Tu & J. Yun | |||||
|
Eve MASO |
-3.5 |
A. Ransick | ||||||
|
Soxb1 MOE26 |
-4.5,-9.9/-3.0,-1.8 |
L. Chen | ||||||
|
Alx1 MOE |
NS,NS/NS/NS |
NS,-2.04/NS/-2.59 |
P. Oliveri | |||||
|
Ets1 MASO + Alx1 MOE47 |
-2.37,-2.49/-2.38/-2.46 |
-3.98,-5.83/-5.01/-7.38 |
P. Oliveri | |||||
|
Hex MASO |
-2.07/NS/-2.23 |
-1.59/NS/-4.43 |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Tel MASO |
-3.82/-1.96 |
-2.25/-1.81 |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Tgif MASO |
NS/NS/NS |
-2.03/-3.12/-2.13 |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Tbr MASO |
NS/NS |
NS/-1.79 |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Erg MASO |
-3.29/-3.89/-2.1/-3.77/-4.0 |
-2.04/-5.18/-4.34/-2.62/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
| Snail |
Pmar1 MOE48 |
+2.99/NS,+2.03 |
S. Wu & D. McClay | |||||
|
Alx MASO48 |
-2.54/-3.4,NS |
S. Wu & D. McClay | ||||||
|
DN-Ets MOE48 |
NS |
S. Wu & D. McClay | ||||||
|
Hex MASO |
NS/NS |
-2.22/-6.18 |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Dri MASO49 |
NS/NS/NS |
-2.91/-5.65/-3.21 |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Tel MASO |
NS/NS/NS |
-6.17/NS/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Tbr MASO |
NS/NS |
NS/-8.57 |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Ets1 MASO |
NS/NS/NS/NS |
NS/-3.06/NS/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Tgif MASO |
NS/NS/NS/NS |
NS/-2.36/NS/-2.05 |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Erg MASO |
NS/NS/NS/NS/NS |
NS/-3.22/-5.74/NS/+2.19 |
Q. Tu, P. Oliveri & J. Yun | |||||
| soxb1 |
Soxb1 MASO26 |
NS,NS/NS,NS/NS/+2.5/NS/+3.0,NS/NS,+2.0/NS (6 h) |
+3.0,+3.4/+3.6,+3.3 |
+4.3,+4.3/+3.8,+3.9 |
C. Livi, J. Rast & K. Young | |||
|
Cad MOE |
NS |
P. Oliveri & K. Young | ||||||
|
Pmar1 MOE |
-7.0 |
P. Oliveri & K. Young | ||||||
|
Pmar1-En |
-4.4 |
P. Oliveri & K. Young | ||||||
|
Pmar1 MOE + Cad MOE |
-5.9 |
P. Oliveri & K. Young | ||||||
|
Pmar1-En + Cad MOE |
-4.2 |
P. Oliveri & K. Young | ||||||
|
Tgif MASO |
NS/NS/NS/NS |
(NS/NS/NS/NS[24 h])(NS/NS/NS/-1.63[27 h]) |
I. Peter & J. Yun | |||||
|
Blimp1b MASO |
NS/NS/+3.47/NS/NS |
(NS/NS/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Krl MASO |
+1.73/NS/NS/NS |
(NS/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
| soxC |
SoxC MASO |
+1.8/+1.89/NS/+1.97/NS |
(NS/NS/+1.49/+1.53/+1.61[24 h])(+1.7/NS/NS[27 h]) |
Q. Tu, P. Oliveri, J. Yun & I. Peter | ||||
|
Ets1 MASO |
-1.84/NS/NS/NS |
NS/NS/-1.69/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Hex MASO |
NS/+1.7/NS |
NS/NS/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Blimp1b MASO |
NS/NS/NS/NS/NS |
(NS/NS/NS/NS/NS[24 h])(NS/-1.93/NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
| sutx |
DnN MOE |
NS |
-2.7/-2.6/-2.9 |
C. Calestani | ||||
|
Gcm MASO |
-4.3 |
-6.7 |
A. Ransick | |||||
|
N MASO |
-3.1 |
NS |
-4.6 |
C. Calestani | ||||
|
Krl MASO |
NS/NS |
-1.7,NS,-3.2,-2.7 |
L. Chen | |||||
|
GataE MASO |
-4.2/-1.9/-1.6 |
P. Y. Lee | ||||||
| tbr |
Bra MASO11 |
-1.8 |
J. Rast | |||||
|
Pmar1 MOE |
+2.0/NS |
+5.9/+3.4 |
P. Oliveri | |||||
|
Pmar1-En |
+1.7/NS |
+4.7/+2.6 |
P. Oliveri | |||||
|
Tbr MASO |
NS/NS/NS |
NS/+1.76/+1.66 |
Q. Tu, P. Oliveri & J. Yun | |||||
| tel |
Tel MASO |
+2.31/+3.78/+2.82 |
+2.63/+2.25/+2.93 |
Q. Tu, P. Oliveri & J. Yun | ||||
|
FoxN2/3 MASO |
NS/+2.12/NS |
NS/NS/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Ets1 MASO |
-1.65/NS/NS/NS |
NS/NS/NS/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Hex MASO |
NS/+1.89/NS |
NS/NS/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Erg MASO |
+1.93/NS/+2.06/NS/NS |
NS/NS/NS/NS/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
| tgif |
Hex MASO |
-2.28/-3.53/-2.85 |
NS/NS/-4.08 |
Q. Tu, P. Oliveri & J. Yun | ||||
|
Ets1 MASO |
-1.67/-1.82/NS/-2.7 |
-2.0/-1.59/-2.51/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Tgif MASO |
-2.49/-1.93/-1.96/-1.41/NS/NS/-2.06 |
(-1.86/-3.07/NS/-1.88/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h]) |
Q. Tu, P. Oliveri, J. Yun & I. Peter | |||||
|
Tel MASO |
NS/-2.39 |
NS/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Tbr MASO |
-2.24/NS/NS |
NS/NS/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
SoxC MASO |
-1.71/NS/NS/NS/NS |
(NS/NS/NS/NS/NS[24 h])(NS/NS/NS[27 h]) |
Q. Tu, P. Oliveri, J. Yun & I. Peter | |||||
|
Dri MASO |
NS/-2.33/NS |
NS/-1.76/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Alx1 MASO |
-2.33/NS/NS |
NS/NS/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Erg MASO |
-3.36/-2.87/-2.13/-2.82/-3.08 |
NS/-3.73/-2.09/-2.21/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
GataE MASO |
NS/NS/NS/-2.31 |
(NS/NS/NS/NS[24 h])(-1.74/NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Bra MASO |
-1.53/-3.85/-1.53/-3.21 |
(-2.04/-3.43/-2.37/-2.31[24 h])(-3.15/-1.64/-1.55/-1.67[27 h]) |
I. Peter & J. Yun | |||||
|
Krl MASO |
NS/-2.05/-3.43/-4.12 |
(-1.62/NS/NS/-1.57[24 h])(NS/NS/NS/-1.94[27 h]) |
I. Peter & J. Yun | |||||
|
Myc MASO |
NS/NS/NS/NS |
(-1.75/-2.65/-1.63/NS[24 h])(-1.79/-2.05/NS/-1.56[27 h]) |
I. Peter & J. Yun | |||||
|
Dac MASO |
-2.05/-1.45/NS/NS |
(-2.79/NS/-2.0/NS[24 h])(NS/NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Blimp1b MASO |
-4.58/-1.41/NS/-3.61/-3.0 |
(-2.62/NS/-2.05/NS/-2.41[24 h])(-2.54/-2.49/NS/-1.81/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Hox11/13b MASO |
NS/NS/NS |
(-2.07/NS/-1.68[24 h])(-2.06/NS/-1.92[27 h]) |
I. Peter | |||||
|
Eve MASO |
NS/NS |
NS/NS/NS |
(NS/NS/NS[24 h])(-1.88/-2.02/NS[27 h]) |
I. Peter | ||||
|
OtxHD MASO |
-1.67/NS/NS |
(NS/NS/NS[24 h])(NS/NS/NS[27 h]) |
I. Peter | |||||
| ui (via endo16) |
Cad MOE9 |
-2.9 |
-6.2 |
-5.2 |
A. Ransick & T. Minokawa | |||
|
GataE MASO |
-2.8,-3.5/-2.7,-1.8 |
P. Y. Lee | ||||||
| unc4.1 |
Tgif MASO50 |
NS/NS/NS/NS |
(NS/-1.86/-1.87/-1.47[24 h])(NS/NS/NS/-2.25[27 h]) |
I. Peter & J. Yun | ||||
|
GataE MASO |
NS/NS/NS/NS |
(NS/NS/-3.67/-2.47[24 h])(-3.04/NS/-4.41/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Blimp1b MASO |
NS/NS/NS/NS/NS |
(NS/-1.41/NS/-2.16/-2.05[24 h])(-3.28/NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Krl MASO |
NS/NS/NS/NS |
(NS/NS/NS/NS[24 h])(NS/-1.46/NS/-2.77[27 h]) |
I. Peter & J. Yun | |||||
|
Dac MASO50 |
NS/NS/NS/NS |
(-3.72/-1.83/-3.36/-2.46[24 h])(NS/-1.53/-1.47/-1.94[27 h]) |
I. Peter & J. Yun | |||||
|
N MASO |
NS/NS/NS |
(+2.68/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Bra MASO |
NS/NS/NS/NS |
(-2.09/-2.96/-2.79/NS[24 h])(NS/-4.95/-1.49/-1.68[27 h]) |
I. Peter & J. Yun | |||||
|
Myc MASO |
NS/NS/NS/NS |
(-1.58/-2.32/-1.83/NS[24 h])(NS/-2.07/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Hox11/13b MASO |
NS/NS/-2.33 |
(NS/NS/-4.06[24 h])(NS/NS/-1.82[27 h]) |
I. Peter | |||||
|
Eve MASO |
NS/NS |
NS/NS/NS |
(-1.93/-2.66/-3.91[24 h])(-2.73/-2.47/-2.53[27 h]) |
I. Peter | ||||
| vegfrII |
Hex MASO |
NS/NS |
NS/-4.03 |
Q. Tu, P. Oliveri & J. Yun | ||||
|
Ets1 MASO |
NS/NS/NS/NS |
-3.66/-2.49/-3.8/-2.4 |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Dri MASO |
NS/NS/NS |
-1.62/-2.2/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Alx1 MASO |
-2.56 |
-2.48 |
NS |
P. Oliveri & Q. Tu | ||||
|
Alx1 MASO |
NS/NS |
NS/-2.87 |
Q. Tu, P. Oliveri & J. Yun | |||||
|
FoxN2/3 MASO |
NS/NS/NS |
NS/-1.84/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Tgif MASO |
NS/NS/NS/NS |
NS/NS/NS/-2.51 |
Q. Tu, P. Oliveri & J. Yun | |||||
|
Erg MASO |
NS/NS/NS/NS/NS |
NS/-2.89/-2.48/NS/NS |
Q. Tu, P. Oliveri & J. Yun | |||||
| wnt8 |
Blimp1b MASO |
NS/NS |
-1.6/NS |
(NS[24 h])(NS[27 h])NS |
C. Livi, I. Peter & J. Yun | |||
|
Blimp1b-En |
-4.2 (6 h),-2.0/-3.7 |
-3.2 |
NS |
C. Livi | ||||
|
Cad MOE |
-4.5 (6 h)/-5.4/-5.3/-11.5 |
-3.9/-2.8 |
-5.3/-5.0/-4.9 |
A. Ransick, P. Oliveri & L. Vega | ||||
|
Otx-En |
NS/NS |
+2.6/+7.7/+2.1 |
NS/NS/NS |
A. Ransick & T. Minokawa | ||||
|
GataE MASO15 |
NS/+2.3/NS/NS/NS |
(NS/NS[24 h])(NS/NS[27 h])NS,NS/NS,NS/NS,NS |
P. Y. Lee, I. Peter & J. Yun | |||||
|
Soxb1 MOE26 |
-2.3,-2.8 |
-2.3,-2.6 |
NS,-2.3/NS |
L. Chen | ||||
|
Pmar1 MOE |
+2.3 |
-4.1 |
P. Oliveri & L. Vega | |||||
|
Pmar1-En |
-2.6 |
P. Oliveri & L. Vega | ||||||
|
Bra MASO |
-2.01/NS/+1.76/NS |
(NS/NS/NS/NS[24 h])(NS/NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Otxa MASO |
NS/+1.71/NS |
(NS/NS/NS[24 h])(NS/NS/NS[27 h]) |
I. Peter | |||||
|
Eve MASO |
NS/NS |
NS/NS/NS |
(NS/NS/-1.66[24 h])(NS/-2.36/NS[27 h]) |
I. Peter | ||||
| z166 |
Gcm MASO |
-2.01/-1.75/-2.07/-1.58 |
S. Materna | |||||
| z188 |
GataE MASO |
NS/NS/NS/NS |
(NS/NS/NS/NS[24 h])(NS/-1.68/NS/NS[27 h]) |
I. Peter & J. Yun | ||||
|
Blimp1b MASO |
-1.83/NS/NS/NS/NS |
(-2.22/NS/NS/NS/NS[24 h])(NS/-2.09/-1.49/-2.09/NS[27 h]) |
I. Peter & J. Yun | |||||
|
N MASO |
NS/NS/NS |
(NS/NS/NS/+1.68[24 h])(NS/NS/NS/NS[27 h]) |
I. Peter & J. Yun | |||||
|
Eve MASO |
NS/NS |
NS/NS/NS |
(NS/NS/-1.77[24 h])(-1.71/NS/NS[27 h]) |
I. Peter | ||||
| z48 |
Tgif MASO |
NS/NS/NS/NS |
NS/+1.71/NS/NS |
Q. Tu, P. Oliveri & J. Yun |
Note: Smaller effects are shown as "NS", except where individual NS data are included together with other significant measurements to display scatter or inconsistencies amongst different batches of cDNA. Commas separate replicate measurements in the same cDNA batch; slashes indicate different batches of cDNA from independent experiments, dashes indicate a missing data point
Perturbations
| Perturbation: | Genes not affected or shown to be affected only indirectly (0 to 24h, unless otherwise noted) |
| Alx1 MASO | L1 (18, 24, 30 h), cyclophillin, delta, endo16, ets1, eve, gatac, gcm, pmar1, sm/pm27, snail, tbr, [erg, foxA, foxN2/3, foxO, hex, hnf6, jun, not, pks, soxC, tel, z48 (18-24 h)] |
| Blimp1b MASO | bra, hox11/13b, lim1, [dac, delta, hesC, msx, notch (18-27 h)] |
| Blimp1b-En | dec, dpt, endo16, foxa, gatae, gcm, not, nrl, otx a, pks, pmar1, soxb1, tbr |
| Bra MASO | capk, dec, delta, dpt, ephx, ficolin, msp130-like, nrl, pks, sm50, tbr, [blimp1b, dac, eve, foxN2/3, gcm, hesC, myc, notch, soxB1, soxC, z188 (18-27 h)] |
| Brn1/2/4 MASO | [Brn1/2/4, otxb1/2 (18, 30, 45 h)], [gatae, hox11/13b (45 h)] |
| Cad MOE | dec, elk, endo16, foxc, hnf6, nrl, soxb1, tbr, z12-1 |
| Dac MASO | [blimp1b, bra, delta, eve, foxN2/3, gataC, gcm, hesC, myc, notch, soxB1, soxC, wnt8, z188 (18-27 h)] |
| DnN MOE | blimp1, bra, capk, dec, delta, e(spl)-1, elk, endo16, eve, foxa, foxb, gatac, hmx, hox11/13b, not, notch, nrl, otx b1/2, su(h), tbr, wnt8 |
| Dri MASO | N, bra, delta, dri (in pmc's), e(s), ets1, eve, foxa, gatae, gcm, hnf6, hox11/13b, lim1, pmar1, tbr, wnt8, z12-1, [elk, otx a, su(h) (16-20 h)], [alx1, erg, foxN2/3, msp130L, pks, soxC, tel, z48 (18-24 h)], [not, nrl (16-24 h)] |
| Dri-En | delta, dri (in pmc's), ets1, hnf6, pmar1, tbr, z12-1 (16-20 h) |
| Elk-En | delta, elk, hnf6 |
| Erg MASO | [foxN2/3, gcm, pmar1, soxC, tbr, z48 (18-24 h)] |
| Ets1 MASO | delta, endo16, eve, foxb, gcm, pmar1, sm30, tbr, [jun, krl, pks, z48 (18-24 h)] |
| Eve MASO | alx1, cyclophilin, dri, ets1, foxc, gatac, gatac, gsc, hmx, msp130, not, otx a, otx b1/2, otx b3, pmar1, sm30, soxb1, tbr, [foxG, msx, myc, notch, soxC (15-27 h)] |
| FoxA MASO | b1/2otx, hmx, not (0-48 h), nrl, otx a, pks, tbr, [brn1/2/4, delta, eve, hox11/13b, wnt8 (18-27, 32, 48 h)], [blimp1, foxc (18, 24, 32, 48 h)], [alx1, blimp1b, dac, elk, foxN2/3, foxP, hesC, hnf1, msx, myc, notch, otxb1/2, soxB1, soxC, tgif, unc4.1, z188 (18-27 h)] |
| FoxB MASO | cyclophillin, endo16, ets1, ficolin, foxa, gatae, hox11/13b, sm27, sm50, tbr, wnt8 |
| FoxN2/3 MASO | [cyclophillin, dri, foxA, foxN2/3, foxb, gatac, gcm, hex, hnf6, jun, krl, msp130, msp130L, not, pm27, pmar1, sm50, snail, soxC, tbr, tgif, z48 (18-24 h)] |
| GataC MASO | bra, capk, delta, dpt, elk, eve, gatae, gcm, not, pks |
| GataE MASO | ??????, blimp1, capk, dec, dri, elk, ets1, eve, ferritin, gatae, gcm, hmx, nk1, otx a, [alx1, dac, delta, foxN2/3, hesC, soxB1, soxC (18-27 h)] |
| Gcm MASO | capk, dec, delta, elk, gatac, gatae, hmx, not, nrl |
| Gsc MASO | alx1, blimp1, bra, decorin, delta (in pmc's), dri, ets1, eve, foxb, fvmo, gatac, gcm, gsc, hmx, hnf6, krl, pks, pmar1, tbr, wnt8, z12-1 (17, 23 h) |
| Hex MASO | [dri, foxA, gcm, gsc, jun, krl, pmar1, tbr, z48 (18-24 h)] |
| Hnf1 MASO | [Brn1/2/4, alx1, blimp1b, bra, dac, delta, elk, endo16, eve, foxG, foxN2/3, foxP, foxa, foxb, gatac, gatae, gcm, hh, hox11/13b, krl, msx, myc, notch, otxb1/2, soxC, soxb1, tgif, unc4.1, wnt8, z188 (24-27 h)] |
| Hnf6 MASO | alx1, blimp1, bra, cyclophillin, delta, dri (in pmc's), elk, ets1, eve, foxa, gatae, gcm, hnf6 (in pmc's), otx a, pmar1, tbr, wnt8, [foxb, krl, z12-1 (19-20 h)] |
| Hox11/13b MASO | blimp1, otx a, otx b, soxb1, wnt8, [Brn1/2/4, alx1, dac, delta, elk, hnf6, otxb1/2, soxC, z188 (18-27 h)] |
| Krl MASO | alx1, blimp1, bra, dec, delta (12, 18-27 h), dri, ets1, eve, eve, gatae, gcm, gsc, hmx, krl, lim1, nrl, otx b1/2, pm27, pmar1, sm50, tbr, wnt8, z12-1, [dac, foxN2/3, foxP, gataC, hesC, msx, myc, notch, soxC, z188 (18-27 h)] |
| MutantSu(H) MOE | [endo16, sm50 (18, 24, 30 h)] |
| Myc MASO | [blimp1b, bra, dac, delta, endo16, eve, foxG, foxN2/3, foxP, gataC, gataE, gcm, hesC, hnf6, notch, soxB1, soxC, wnt8, z188 (18-27 h)] |
| N MASO | [foxa, foxb (18-27, 29, 41 h)], [bra, eve (21, 24-27, 29, 41 h)], [espl1, gatae, hmx, nrl, su (21, 29, 41 h)], [brn1/2/4, dac, foxN2/3, foxP, hesC, hh, myc, soxB1, soxC, wnt8 (18-27 h)] |
| Otx-En | dec, delta, elk, eve, gcm, otx a, pks, tbr |
| OtxHD MASO | [alx1, blimp1b, bra, dac, delta, elk, eve, foxN2/3, foxP, gatae, gcm, hnf6, hox11/13b, krl, myc, notch, otxb1/2, soxC, soxb1, unc4.1, wnt8, z188 (18-27 h)] |
| Otxa MASO | [alx1, blimp1b, bra, endo16, eve, foxG, foxP, foxa, foxb, gatac, gatae, gcm, hox11/13b, myc, soxC, soxb1, tgif, unc4.1, z188 (18-27 h)] |
| Pmar1 MOE | blimp1, elk, foxa, hnf6, krl, sm30, wnt8 |
| Pmar1-En | blimp1, elk, foxa, hnf6, sm30, wnt8 |
| SoxC MASO | [cyclophillin, dri, erg, ets1, foxO, hex, jun, msp130L, not, nrl, pm27, pmar1, sm50, snail, tbr, tel, vegfrII, z48 (18-24 h)], [alx1, blimp1b, bra, dac, delta, elk, endo16, eve, foxA, foxG, foxN2/3, foxP, foxb, gataC, gatae, gcm, hh, hnf1, hnf6, hox11/13b, krl, msx, myc, notch, otxb1/2, soxb1, unc4.1, wnt8, z188 (18-27 h)] |
| Soxb1 MASO | blimp1, bra, dec, dpt, dri, elk, endo16, foxa, foxb, foxc, gatac, krl, nrl, pmar1, wnt8, z12-1, [delta, gatae, gcm, hox11/13b, tbr (0-16 h)] |
| Soxb1 MOE | blimp1, dri, endo16, hnf6, tbr |
| Soxb1-En | alx1 (12 h), [bra, delta, endo16, ets-1, eve, foxa, foxb, gatac, gcm, hox11/13b, krl, msp130, pm27, sm50, wnt8 (18, 24 h)] |
| Tbr MASO | alx1, cyclophilin, delta, endo16, ets1, ets1, eve, ficolin, gatae, gcm, msp130, msp130L, pm27, [cyclophillin, foxA, foxN2/3, foxO, gatac, hex, jun, not, pks, pmar1, soxC, tel, vegfrII, z48 (18-24 h)] |
| Tel MASO | [cyclophillin, dri, erg, ets1, ficolin, foxA, foxB, foxN2/3, foxO, gcm, hex, hnf6, jun, krl, msp130, msp130L, not, pks, pmar1, pmar1, soxC, tbr, vegfrII, z48 (18-24 h)] |
| Tgif MASO | [cyclophillin, ets1, jun, pmar1, tbr, tel (18-24 h)], [dac, delta, elk, endo16, eve, gatac, hesC, hox11/13b, msx, myc, notch, soxC, wnt8, z188 (18-27 h)] |
Footnotes
1Must be affected indirectly via intercellular signaling because Bra is not present in cells where these genes are active.
2At 30 h affected indirectly via cell signaling, since at 30 h Dri and Gsc are expressed only in OE.
3Thought to be indirect input, via GataE.
4Probably via GataC.
5Probably via Bra.
6Probably in OE where both Elk and Lim1 are expressed then.
7Probably indirect via Gcm.
8Probably indirect via gcm.
9The inputs inferred from effects on endo16.
10Effect on endo16 is via Ui since no necessary GataE site in endo16.
11Probably via ets1; based on ECRA.
12Indirect, because rescued by blimp1 MOE.
14Probably indirect via elk.
15Weak effect 18 h only, probably not significant, since wnt8 expression is disappearing in gatae domain at 18 h. Effect seen is probably via Otx which represses wnt8 in this period.
17Likely indirect via gatae.
18Late Krl effects likely to be indirect results of effects of Krl loss on endomesoderm specification (Howard et al., 2000).
19Obviously indirect via pmar1.
20Only when dri is expressed in OE (>30 h).
21Possibly indirect via, because if there were an Otx site in gatac gene effect would have been seen earlier than 24 h.
22Must be indirect because direct sm50 inputs are known.
23Normalized to different standards in same run, i.e., ubiquitin and 18S rRNA.
24 alx1 expressed specifically in pmc's; discovered by Ettensohn et al.
26In collaboration with R. and L. Angerer who provided the samples measured.
27Likely an artifact of expressing Blimp1-En MOE pmc's, since foxb is expressed only in pmc's at this stage (i.e., there could be a later interaction of Blimp1 and Soxb in hindgut where they are both expressed after gastrulation).
28Weak effect likely indirect since gatac is expressed in smc's at 27 h and foxb in pmc's, later hindgut on oral side (plus oral ectoderm).
30Not indirect via GataE because N MASO does not affect gatac though dnN does.
31Indirect effects on gatac does not turn on until after Tcf input is faded out, but all other inputs depend on endomesoderm specification.
32Effect on initial phase of gatac expression, before it becomes exclusive with gcm (oral vs aboral and lateral).
33Could be indirect via Ets1 effect on tbr; effect of Ets1 on foxb is stronger than tbr effect on foxb.
34At least early (<24 h) effects on the three fvmo genes probably via gcm.
35Via dri (see Amore et al., 2002).
37Implies late blastula pmc domain to mesoderm indirect effect on oral side, where gatac is then expressed in mesoderm: not yet understood.
38Since Gsc is a repressor (Angerer et al.) implies existence of mid-late blastula repressor of skeletogenic function controlled by gsc: perhaps a timing device.
40Very possibly indirect via dri.
41Unlikely a direct transcriptional effect, since eve expression is not affected by Soxb1-Eng MOE.
42Possibly indirect.
43Likely via dri.
45Probably in OE because most gsc expression at 24 h is there.
47Double perturbation results show both inputs, Alx1 and Ets1, are required when indicated.
48Data for mesenchyme blastula stage of Lytechinus variegatus
49Probably Indirect
50Unc4.1 is expressed in the aboral veg1 ectoderm, starting at 24h; effect must be indirect